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authormiwi <miwi@FreeBSD.org>2009-12-13 08:21:04 +0800
committermiwi <miwi@FreeBSD.org>2009-12-13 08:21:04 +0800
commit24241acd19de430a4c3e3a5f1650c8cb34222beb (patch)
tree944fa5ca41fec02e5229200f33a16b2404f03a81 /science
parente476979f5dac13eb882934af3e68926e92ca62a1 (diff)
downloadfreebsd-ports-graphics-24241acd19de430a4c3e3a5f1650c8cb34222beb.tar.gz
freebsd-ports-graphics-24241acd19de430a4c3e3a5f1650c8cb34222beb.tar.zst
freebsd-ports-graphics-24241acd19de430a4c3e3a5f1650c8cb34222beb.zip
- Update to 4.0.7
PR: 141284 Submitted by: Florian Smeets <flo@kasimir.com> (maintainer)
Diffstat (limited to 'science')
-rw-r--r--science/gromacs/Makefile3
-rw-r--r--science/gromacs/distinfo6
-rw-r--r--science/gromacs/files/patch-include__gmx_cyclecounter.h11
-rw-r--r--science/gromacs/pkg-plist9
4 files changed, 4 insertions, 25 deletions
diff --git a/science/gromacs/Makefile b/science/gromacs/Makefile
index 2a21bc73fad..134349ed349 100644
--- a/science/gromacs/Makefile
+++ b/science/gromacs/Makefile
@@ -6,8 +6,7 @@
#
PORTNAME= gromacs
-PORTVERSION= 4.0.5
-PORTREVISION= 1
+PORTVERSION= 4.0.7
CATEGORIES= science
MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/
diff --git a/science/gromacs/distinfo b/science/gromacs/distinfo
index 498828c700c..5999ece5cda 100644
--- a/science/gromacs/distinfo
+++ b/science/gromacs/distinfo
@@ -1,3 +1,3 @@
-MD5 (gromacs-4.0.5.tar.gz) = 2db2261852a4d3a97547979f379dee94
-SHA256 (gromacs-4.0.5.tar.gz) = 436b7a2a1ba3637eb07e30d676d78962008373a28fd17a3d889fa5816ca30339
-SIZE (gromacs-4.0.5.tar.gz) = 8465397
+MD5 (gromacs-4.0.7.tar.gz) = 51369bd553e6bba4085a58bcf23d337d
+SHA256 (gromacs-4.0.7.tar.gz) = 048f8ece2829f01d99f7e04e1d6e8f88d3a32273192274f2e9fcf71f41f212c1
+SIZE (gromacs-4.0.7.tar.gz) = 8404518
diff --git a/science/gromacs/files/patch-include__gmx_cyclecounter.h b/science/gromacs/files/patch-include__gmx_cyclecounter.h
deleted file mode 100644
index 2af9cede430..00000000000
--- a/science/gromacs/files/patch-include__gmx_cyclecounter.h
+++ /dev/null
@@ -1,11 +0,0 @@
---- ./include/gmx_cyclecounter.h.orig 2009-03-31 13:25:55.036329291 +0200
-+++ ./include/gmx_cyclecounter.h 2009-03-31 13:26:11.504803886 +0200
-@@ -408,7 +408,7 @@
- static __inline__ gmx_cycles_t gmx_cycles_read(void)
- {
- /* gcc inline assembly on sparc v9 */
-- ticks ret;
-+ gmx_cycles_t ret;
- __asm__("rd %%tick, %0" : "=r" (ret));
- return ret;
- }
diff --git a/science/gromacs/pkg-plist b/science/gromacs/pkg-plist
index 3f71c8aeee2..e44ded40bd9 100644
--- a/science/gromacs/pkg-plist
+++ b/science/gromacs/pkg-plist
@@ -490,15 +490,6 @@ lib/libmd%%SUFFIX_MPI%%%%SUFFIX_D%%.so.5
%%DATADIR%%/top/ffG53a6bon.itp
%%DATADIR%%/top/ffG53a6nb.itp
%%DATADIR%%/top/ff_dum.itp
-%%DATADIR%%/top/ffcharmm27.atp
-%%DATADIR%%/top/ffcharmm27bon.itp
-%%DATADIR%%/top/ffcharmm27-c.tdb
-%%DATADIR%%/top/ffcharmm27.ddb
-%%DATADIR%%/top/ffcharmm27.hdb
-%%DATADIR%%/top/ffcharmm27.itp
-%%DATADIR%%/top/ffcharmm27nb.itp
-%%DATADIR%%/top/ffcharmm27-n.tdb
-%%DATADIR%%/top/ffcharmm27.rtp
%%DATADIR%%/top/ffencads-c.tdb
%%DATADIR%%/top/ffencads-n.tdb
%%DATADIR%%/top/ffencads.atp