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* reimport biology/genpakijliao2001-02-281-0/+1
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* module name conflict with print/gp, so remove it and I'll reimport it againijliao2001-02-281-1/+0
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* add gpijliao2001-02-281-0/+1
| | | | GP is a set of small utilities to manipulate DNA sequences
* - New port: biology/fasta3, which comprises the FASTA3 suite of DNA andjeh2001-02-121-0/+1
| | | | | | | | | protein sequence search programs - FASTA3 updates only some of the elements of FASTA2, which is why I have submitted ports of both versions (as biology/fasta and biology/fasta3) PR: 24716 Submitted by: Johann Visagie <johann@egenetics.com>
* New port: biology/fasta, the FASTA2 suite of DNA and protein sequencejeh2001-02-121-0/+1
| | | | | | | search tools PR: 24715 Submitted by: Johann Visagie <johann@egenetics.com>
* add gaussian98, an ab-initio molecular orbital calculation program.sf2001-02-111-0/+1
| | | | | PR: 23577 Submitted by: NAKATA, Maho <chat95@mbox.kyoto-inet.or.jp>
* New Port: biology/ncbi-toolkitjeh2000-10-291-0/+1
| | | | | | | National Center for Biotechnology Information (NCBI) Development Toolkit. PR: 22388 Submitted by: Tony Maher <tony.maher@ebioinformatics.com>
* Initial import of fastDNAml Version 1.2.2jeh2000-10-121-0/+1
| | | | | | | The faster variant of DNAML, makes phylogenetic trees using maximum likelihood PR: 21931 Submitted by: Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
* Initial import of biology/biojavajeh2000-10-101-0/+1
| | | | | PR: 21678 Submitted by: Brad Chapman <chapmanb@arches.uga.edu>
* This is nab (nucleic acid builder), a language for macromoleculesjeh2000-10-101-0/+1
| | | | | PR: 21585 Submitted by: M. L. Dodson <bdodson@scms.utmb.EDU>
* Add emboss, the European Molecular Biology Open Software Suitenbm2000-08-011-0/+1
| | | | | PR: ports/20317 Submitted by: Johann Visagie <johann@egenetics.com>
* Add py-biopython, is a collection of Python packages and modules creatednbm2000-07-311-0/+1
| | | | | | | | by the Biopython Project, intended to provide the basis for building bioinformatics applications in the Python language. PR: ports/20260 Submitted by: Johann Visagie <johann@egenetics.com>
* Add BioPerl, a collection of Perl5 mods for bioinformatics/genomicsnbm2000-07-281-0/+1
| | | | | PR: ports/20252 Submitted by: Johann Visagie <johann@egenetics.com>
* Add p5-AcePerl, a perl interface to the ACEDB genome database systemnbm2000-07-281-0/+1
| | | | | PR: ports/20223 Submitted by: Johann Visagie <johann@egenetics.com>
* Add sim4, an implementation of the sim4 algorithm for aligning expressednbm2000-07-271-0/+1
| | | | | | | DNA with genomic sequences PR: ports/20219 Submitted by: Johann Visagie <johann@egenetics.com>
* Add xdrawchem 0.82 - a program for drawing moleculesalex2000-07-191-0/+1
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* Activating the chemeq, clustalw, paml, and phylip ports.steve2000-07-101-0/+4
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* Added gperiodic and xmolwttaoka1999-09-071-0/+2
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* Change Id->FreeBSD.obrien1999-08-251-1/+1
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* Added deft and ortep3taoka1999-05-191-1/+3
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* Add platon and moldentaoka1999-05-071-1/+3
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* Add mopac and psi88 (Move mopac and psi88 from misc to biology)taoka1999-05-061-1/+3
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* Activate tinker.jkoshy1998-11-171-1/+2
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* Turn on hmmer.steve1998-07-131-1/+2
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* Activate povchem.vanilla1998-03-161-1/+2
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* Activate kinemagejseger1998-01-301-1/+2
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* Activate seaview.vanilla1997-12-221-1/+2
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* Activate babel.vanilla1997-12-221-1/+2
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* Activate rasmol.vanilla1997-12-161-2/+2
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* The new ports category "biology" starts here today. No Darwinasami1997-12-131-0/+6
jokes please!