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* MFH: r474562antoine2018-07-131-0/+1
* Mark various ports broken on mips64 and, where appropriate, mips.linimon2018-07-021-2/+4
* Mark BROKEN: missing plistantoine2018-06-291-0/+3
* Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mktcberner2018-06-292-4/+4
* New port: biology/igv: Visualization tool for genomic datasetsyuri2018-06-266-0/+77
* Mark as broken on aarch64.linimon2018-06-251-0/+2
* - Update to 5.17.0wen2018-06-253-4/+5
* biology/phyml: update to v3.3.20180621fernape2018-06-232-5/+6
* Update math/gsl to 2.5tcberner2018-06-231-0/+1
* biology/ngs-sdk: Update 2.9.0 -> 2.9.1yuri2018-06-223-5/+5
* Mark these ports as broken on aarch64.linimon2018-06-222-0/+4
* Mark as broken on aarch64, and, where appropriate, armvX.linimon2018-06-224-0/+16
* Use PY_FLAVOR for dependencies.mat2018-06-216-13/+13
* Mark as broken on powerpc64 pending fix for PR 199603.linimon2018-06-191-0/+2
* Adjust USES to fix builds on gcc-based architectures.linimon2018-06-191-1/+1
* Mark ports broken on powerpc64, categories a-c.linimon2018-06-181-3/+4
* biology/bedtools: Fix Makefile to respect PREFIXjwb2018-06-172-0/+22
* New port: biology/py-orange3-bioinformatics: Orange add-on providing common f...yuri2018-06-144-0/+41
* biology/py-Genesis-PyAPI: Remove stray USES=fortranyuri2018-06-131-1/+1
* New port: biology/py-Genesis-PyAPI: API for the Genesis platform for genetics...yuri2018-06-134-0/+29
* biology/artemis: Update 9 -> 17.0.1-11yuri2018-06-124-1719/+72
* New port: biology/ngs-sdk: Tools and libraries for using data in the INSDC Se...yuri2018-06-119-0/+256
* Remove expired ports:rene2018-06-0751-1777/+0
* Update to 2.0.0 and pass maintainership to committer.krion2018-06-068-345/+121
* Add new port: biology/infernalkrion2018-06-066-0/+117
* Mark as broken on powerpc64. The entire, unhelpful, error message is:linimon2018-06-031-0/+2
* Adjust USES to fix building on gcc-based archs (in particular, powerpc64).linimon2018-06-031-1/+1
* Update WWWsunpoet2018-05-2813-13/+13
* biology/hyphy: Update to version 2.3.13jrm2018-05-233-5/+10
* biology/clustal-omega: Multiple alignment of nucleic acid and protein, replac...jwb2018-05-225-0/+64
* biology/clustalx: Multiple alignment of nucleic acid and protein sequences wi...jwb2018-05-225-0/+59
* biology/clustalw: Fix license, take maintainershipjwb2018-05-212-5/+6
* biolog/molden: unbreak after at least two intransparent distfile updatesjmd2018-05-212-6/+4
* biology/fastx-toolkit: Fix build on FreeBSD 12jwb2018-05-162-2/+19
* Add upstream patch to fix the build with Qt 5.10.rakuco2018-05-162-1/+31
* - Update to 3.3.20180214wen2018-05-152-5/+6
* biology/diamond: Update to version 0.9.22jrm2018-05-152-4/+4
* biology/hyphy: Bump PORTREVISION after upstream rerolled releasejrm2018-05-153-14/+4
* biology/py-biopython: Unbreak on python3; Add licenseyuri2018-05-141-2/+9
* biology/iqtree: Update to version 1.6.5jrm2018-05-122-4/+4
* New port, biology/hyphy: Hypothesis testing using Phylogeniesjrm2018-05-117-0/+645
* Mark BROKEN: checksum and size mismatchantoine2018-05-071-0/+2
* Deprecate ports broken for more than 6 monthsantoine2018-05-055-0/+10