Initial import of biology/biojava

PR:		21678
Submitted by:	Brad Chapman <chapmanb@arches.uga.edu>

1 files changed, 59 insertions, 0 deletions

diff --git a/biology/biojava/Makefile b/biology/biojava/Makefile
new file mode 100644
index 000000000000..76fe2ff54f1e
--- /dev/null
+++ b/biology/biojava/Makefile
@@ -0,0 +1,59 @@
+# New ports collection makefile for: biojava
+# Date created:	15 September 2000
+# Whom:		FreeBSD Bio porters (bio@freebsd.net)
+#
+# $FreeBSD$
+#
+
+PORTNAME=	biojava
+PORTVERSION=	1.01
+CATEGORIES=	biology java
+MASTER_SITES=	ftp://ftp.biojava.org/pub/biojava/source/
+
+MAINTAINER=	bio@freebsd.net
+
+BUILD_DEPENDS=	${JAVA_COMMAND}:${PORTSDIR}/java/linux-jdk
+
+JDK_VERSION=	1.2.2
+JAVAVERSION=	linux-jdk${JDK_VERSION}
+JAVADIR=	${PREFIX}/${JAVAVERSION}
+JAVA_COMPILE=	${JAVADIR}/bin/javac
+JAVA_COMMAND=	${JAVADIR}/bin/java
+
+do-build:
+	@(cd ${WRKSRC}; \
+		${JAVA_COMPILE} build/Builder.java; \
+		${SETENV} PATH=${PATH}:${JAVADIR}/bin \
+		${JAVA_COMMAND} build.Builder all;)
+
+.if !defined(NOPORTDOCS)
+	@(cd ${WRKSRC}; ${SETENV} PATH=${PATH}:${JAVADIR}/bin \
+	${JAVA_COMMAND} build.Builder docs;)
+.endif
+
+do-install:
+	@(cd ${WRKSRC}; \
+		${MKDIR} ${PREFIX}/share/java/classes/; \
+		${CP} ${WRKSRC}/biojava.jar ${PREFIX}/share/java/classes/; \
+		${CP} ${WRKSRC}/xml.jar ${PREFIX}/share/java/classes/; \
+		${MKDIR} ${PREFIX}/share/java/${PKGNAME}/; \
+		${CP} -R README LICENSE ${PREFIX}/share/java/${PKGNAME}/; \
+		${CP} -R ${WRKSRC}/demos ${PREFIX}/share/java/${PKGNAME}/;)
+
+.if !defined(NOPORTDOCS)
+	@(${CP} -R ${WRKSRC}/docs ${PREFIX}/share/java/${PKGNAME})
+.endif)
+
+post-install:
+.if !defined(BATCH)
+	@${ECHO_MSG} ""
+	@${ECHO_MSG} "Libraries installed at: ${PREFIX}/share/java/classes/"
+	@${ECHO_MSG} "You should edit your CLASSPATH to include the jar files"
+	@${ECHO_MSG} "in this directory."
+	@${ECHO_MSG} ""
+	@${ECHO_MSG} "Docs and demos are installed in:"
+	@${ECHO_MSG} "${PREFIX}/share/java/${PKGNAME}"
+	@${ECHO_MSG} ""
+.endif
+
+.include <bsd.port.mk>