diff options
| author | Kirill Ponomarev <krion@FreeBSD.org> | 2004-03-12 21:53:23 +0800 |
|---|---|---|
| committer | Kirill Ponomarev <krion@FreeBSD.org> | 2004-03-12 21:53:23 +0800 |
| commit | 03062baaf5081cb4949714a58f22f562e6855cbe (patch) | |
| tree | 42f918d033c39be46732858ba892d88649b6dcc7 /biology/sim4 | |
| parent | c3ec81783c1a034dc04b8bf5b33a28ce876ddb8f (diff) | |
| download | freebsd-ports-gnome-03062baaf5081cb4949714a58f22f562e6855cbe.tar.gz freebsd-ports-gnome-03062baaf5081cb4949714a58f22f562e6855cbe.tar.zst freebsd-ports-gnome-03062baaf5081cb4949714a58f22f562e6855cbe.zip | |
- Update to version 2003.09.21
PR: ports/64160
Submitted by: Liam J. Foy <liamfoy@sepulcrum.org>
Diffstat (limited to 'biology/sim4')
| -rw-r--r-- | biology/sim4/Makefile | 8 | ||||
| -rw-r--r-- | biology/sim4/distinfo | 4 | ||||
| -rw-r--r-- | biology/sim4/files/patch-aa | 10 | ||||
| -rw-r--r-- | biology/sim4/pkg-descr | 2 |
4 files changed, 9 insertions, 15 deletions
diff --git a/biology/sim4/Makefile b/biology/sim4/Makefile index dedfc9fc9ca1..7864d6efa064 100644 --- a/biology/sim4/Makefile +++ b/biology/sim4/Makefile @@ -6,7 +6,7 @@ # PORTNAME= sim4 -PORTVERSION= 2002.03.03 +PORTVERSION= 2003.09.21 CATEGORIES= biology MASTER_SITES= http://globin.cse.psu.edu/ftp/dist/sim4/ DISTNAME= ${PORTNAME}.${PORTVERSION:S/./-/g} @@ -16,9 +16,15 @@ COMMENT= An algorithm for aligning expressed DNA with genomic sequences WRKSRC= ${WRKDIR}/sim4.${PORTVERSION:S/./-/g} +USE_REINPLACE= yes + ALL_TARGET= sim4 PLIST_FILES= bin/sim4 +post-patch: + ${REINPLACE_CMD} -e 's|^CC=|CC?=|g ; \ + s|^CFLAGS=|CFLAGS+=|g' ${WRKSRC}/Makefile + do-install: @ ${INSTALL_PROGRAM} ${WRKSRC}/sim4 ${PREFIX}/bin diff --git a/biology/sim4/distinfo b/biology/sim4/distinfo index f15e1368ab9f..852d372df69c 100644 --- a/biology/sim4/distinfo +++ b/biology/sim4/distinfo @@ -1,2 +1,2 @@ -MD5 (sim4.2002-03-03.tar.gz) = 7bb2a4f823bd163752b578208452406a -SIZE (sim4.2002-03-03.tar.gz) = 54399 +MD5 (sim4.2003-09-21.tar.gz) = 7062ed6e5b5c9a327213c0f9cae7a90a +SIZE (sim4.2003-09-21.tar.gz) = 60814 diff --git a/biology/sim4/files/patch-aa b/biology/sim4/files/patch-aa deleted file mode 100644 index 41a155f5f96e..000000000000 --- a/biology/sim4/files/patch-aa +++ /dev/null @@ -1,10 +0,0 @@ ---- Makefile.orig Thu Aug 24 23:40:44 2000 -+++ Makefile Mon Aug 28 14:26:05 2000 -@@ -5,6 +5,6 @@ - # For gcc, ``-O2'' works well. - - sim4: -- cc -o sim4 -I. -O *.c -lm -+ ${CC} -o sim4 -I. ${CFLAGS} *.c -lm - clean: - rm -f sim4 *.o diff --git a/biology/sim4/pkg-descr b/biology/sim4/pkg-descr index 9dd3aac791b3..0891421ced90 100644 --- a/biology/sim4/pkg-descr +++ b/biology/sim4/pkg-descr @@ -8,5 +8,3 @@ Genome Research 8, 967-974. WWW: http://globin.cse.psu.edu/ Port maintained by the FreeBSD bio-porters mailing list. - --- FreeBSD bio-porters <bio@freebsd.net> |