Add p5-Bio-ASN1-EntrezGene, a Regular expression-based Perl Parser for

NCBI Entrez Gene.

PR:		87423
Submitted by:	Mauricio Herrera Cuadra <mauricio@arareko.net>
Approved by:	novel (mentor) (implicit)

5 files changed, 61 insertions, 0 deletions

diff --git a/biology/Makefile b/biology/Makefile
index 9488229aa980..c81dd0446941 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -43,6 +43,7 @@
     SUBDIR += nclever
     SUBDIR += ortep3
     SUBDIR += p5-AcePerl
+    SUBDIR += p5-Bio-ASN1-EntrezGene
     SUBDIR += p5-Bio-Das
     SUBDIR += p5-bioperl
     SUBDIR += paml
diff --git a/biology/p5-Bio-ASN1-EntrezGene/Makefile b/biology/p5-Bio-ASN1-EntrezGene/Makefile
new file mode 100644
index 000000000000..05378930aa0b
--- /dev/null
+++ b/biology/p5-Bio-ASN1-EntrezGene/Makefile
@@ -0,0 +1,34 @@
+# New ports collection makefile for:	biology/p5-Bio-ASN1-EntrezGene
+# Date created:				12 October 2005
+# Whom:					Mauricio Herrera Cuadra <mauricio@arareko.net>
+#
+# $FreeBSD$
+#
+
+PORTNAME=	Bio-ASN1-EntrezGene
+PORTVERSION=	1.091
+CATEGORIES=	biology perl5
+MASTER_SITES=	${MASTER_SITE_PERL_CPAN}
+MASTER_SITE_SUBDIR=	Bio
+PKGNAMEPREFIX=	p5-
+EXTRACT_SUFX=	.tgz
+
+MAINTAINER=	mauricio@arareko.net
+COMMENT=	Regular expression-based Perl Parser for NCBI Entrez Gene
+
+WRKSRC=		${WRKDIR}/Bio-ASN1-EntrezGene-1.09
+
+PERL_CONFIGURE=	yes
+
+MAN3=		Bio::ASN1::EntrezGene.3 \
+		Bio::ASN1::EntrezGene::Indexer.3 \
+		Bio::ASN1::Sequence.3 \
+		Bio::ASN1::Sequence::Indexer.3
+
+.include <bsd.port.pre.mk>
+
+.if ${PERL_LEVEL} < 500600
+IGNORE=	requires at least perl5.6 to build
+.endif
+
+.include <bsd.port.post.mk>
diff --git a/biology/p5-Bio-ASN1-EntrezGene/distinfo b/biology/p5-Bio-ASN1-EntrezGene/distinfo
new file mode 100644
index 000000000000..e7a08e192253
--- /dev/null
+++ b/biology/p5-Bio-ASN1-EntrezGene/distinfo
@@ -0,0 +1,2 @@
+MD5 (Bio-ASN1-EntrezGene-1.091.tgz) = fabb888e03435007e08050def1aed0ac
+SIZE (Bio-ASN1-EntrezGene-1.091.tgz) = 36360
diff --git a/biology/p5-Bio-ASN1-EntrezGene/pkg-descr b/biology/p5-Bio-ASN1-EntrezGene/pkg-descr
new file mode 100644
index 000000000000..1e01411c8adb
--- /dev/null
+++ b/biology/p5-Bio-ASN1-EntrezGene/pkg-descr
@@ -0,0 +1,12 @@
+Bio::ASN1::EntrezGene is a regular expression-based Perl Parser for NCBI Entrez
+Gene genome databases (http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene). It
+parses an ASN.1-formatted Entrez Gene record and returns a data structure that
+contains all data items from the gene record.
+
+The parser will report error & line number if input data does not conform to the
+NCBI Entrez Gene genome annotation file format.
+
+WWW: http://search.cpan.org/dist/Bio-ASN1-EntrezGene/
+
+- Mauricio
+mauricio@arareko.net
diff --git a/biology/p5-Bio-ASN1-EntrezGene/pkg-plist b/biology/p5-Bio-ASN1-EntrezGene/pkg-plist
new file mode 100644
index 000000000000..c69aaacde5d6
--- /dev/null
+++ b/biology/p5-Bio-ASN1-EntrezGene/pkg-plist
@@ -0,0 +1,12 @@
+%%SITE_PERL%%/Bio/ASN1/EntrezGene.pm
+%%SITE_PERL%%/Bio/ASN1/EntrezGene/Indexer.pm
+%%SITE_PERL%%/Bio/ASN1/Sequence.pm
+%%SITE_PERL%%/Bio/ASN1/Sequence/Indexer.pm
+%%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/ASN1/EntrezGene/.packlist
+@dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/ASN1/EntrezGene
+@unexec rmdir %D/%%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/ASN1 2>/dev/null || true
+@unexec rmdir %D/%%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio 2>/dev/null || true
+@unexec rmdir %D/%%SITE_PERL%%/Bio/ASN1/EntrezGene 2>/dev/null || true
+@unexec rmdir %D/%%SITE_PERL%%/Bio/ASN1/Sequence 2>/dev/null || true
+@unexec rmdir %D/%%SITE_PERL%%/Bio/ASN1 2>/dev/null || true
+@unexec rmdir %D/%%SITE_PERL%%/Bio 2>/dev/null || true