diff options
| author | miwi <miwi@FreeBSD.org> | 2007-03-27 16:01:54 +0800 |
|---|---|---|
| committer | miwi <miwi@FreeBSD.org> | 2007-03-27 16:01:54 +0800 |
| commit | 6954b6ecc38269dd939b070d658600b773184128 (patch) | |
| tree | 85c914543fc2f79df18c68da154c8e8502722bd4 /biology | |
| parent | 8e7e58be6905b1792e431442280ad3c7aff0d438 (diff) | |
| download | freebsd-ports-gnome-6954b6ecc38269dd939b070d658600b773184128.tar.gz freebsd-ports-gnome-6954b6ecc38269dd939b070d658600b773184128.tar.zst freebsd-ports-gnome-6954b6ecc38269dd939b070d658600b773184128.zip | |
- Update to 1.5-beta2
- Pass maintainership to submitter
PR: 110621
Submitted by: Nemo Liu<nemoliu@gmail.com>
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/biojava/Makefile | 17 | ||||
| -rw-r--r-- | biology/biojava/distinfo | 6 | ||||
| -rw-r--r-- | biology/biojava/files/patch-build.xml | 4 |
3 files changed, 14 insertions, 13 deletions
diff --git a/biology/biojava/Makefile b/biology/biojava/Makefile index dc5a7b5e2e5e..af76b8faaf55 100644 --- a/biology/biojava/Makefile +++ b/biology/biojava/Makefile @@ -6,7 +6,7 @@ # PORTNAME= biojava -DISTVERSION= 1.5-beta +DISTVERSION= 1.5-beta2 PORTEPOCH= 1 CATEGORIES= biology java MASTER_SITES= http://www.biojava.org/download/bj15b/all/:source \ @@ -15,12 +15,16 @@ DISTFILES= ${PORTNAME}-${DISTVERSION}${EXTRACT_SUFX}:source \ bytecode.jar:bin EXTRACT_ONLY= ${PORTNAME}-${DISTVERSION}${EXTRACT_SUFX} -MAINTAINER= ports@FreeBSD.org +MAINTAINER= nemoliu@gmail.com COMMENT= Open-source java tools for processing biological data BUILD_DEPENDS= ${JAVALIBDIR}/hsqldb.jar:${PORTSDIR}/databases/hsqldb \ + ${JAVALIBDIR}/xml-apis.jar:${PORTSDIR}/textproc/xerces-j \ + ${JAVALIBDIR}/jakarta-regexp.jar:${PORTSDIR}/java/jakarta-regexp \ + ${JAVALIBDIR}/commons-cli.jar:${PORTSDIR}/java/jakarta-commons-cli \ ${JAVALIBDIR}/commons-dbcp.jar:${PORTSDIR}/java/jakarta-commons-dbcp \ - ${JAVALIBDIR}/commons-pool.jar:${PORTSDIR}/java/jakarta-commons-pool + ${JAVALIBDIR}/commons-pool.jar:${PORTSDIR}/java/jakarta-commons-pool \ + ${JAVALIBDIR}/commons-collections.jar:${PORTSDIR}/java/jakarta-commons-collections RUN_DEPENDS= ${JAVALIBDIR}/hsqldb.jar:${PORTSDIR}/databases/hsqldb \ ${JAVALIBDIR}/xml-apis.jar:${PORTSDIR}/textproc/xerces-j \ ${JAVALIBDIR}/jakarta-regexp.jar:${PORTSDIR}/java/jakarta-regexp \ @@ -33,12 +37,8 @@ RUN_DEPENDS= ${JAVALIBDIR}/hsqldb.jar:${PORTSDIR}/databases/hsqldb \ BUILD_DEPENDS+= ${JAVALIBDIR}/junit.jar:${PORTSDIR}/java/junit .endif -BROKEN= Does not build -DEPRECATED= ${BROKEN} -EXPIRATION_DATE=2007-04-10 - USE_JAVA= yes -JAVA_VERSION= 1.4+ +JAVA_VERSION= 1.5+ USE_ANT= yes MAKE_ENV= CLASSPATH="${JAVALIBDIR}" ALL_TARGET= compile-apps @@ -48,6 +48,7 @@ PLIST_SUB+= VER=${DISTVERSION} JARFILES= apps-${DISTVERSION}.jar biojava.jar bytecode.jar PORTDOCS= biojava SAMPLES= demos +WRKSRC=${WRKDIR} .if !defined(NOPORTDOCS) ALL_TARGET+= javadocs-biojava diff --git a/biology/biojava/distinfo b/biology/biojava/distinfo index 000afa26d21a..ca1c5c4fb11d 100644 --- a/biology/biojava/distinfo +++ b/biology/biojava/distinfo @@ -1,6 +1,6 @@ -MD5 (biojava-1.5-beta.tar.gz) = 8dc7307d9dc4bc9dd9222dfaaee5d047 -SHA256 (biojava-1.5-beta.tar.gz) = a8e0ba3a393bc70606bf7393255077b32bd1c1980f5daeec07c7362f0d2985e1 -SIZE (biojava-1.5-beta.tar.gz) = 15777707 +MD5 (biojava-1.5-beta2.tar.gz) = 904e9a5600102a9a5238b87868e3f09f +SHA256 (biojava-1.5-beta2.tar.gz) = f2912bc90d4b9c01ac24e9db9718203af01b098538020989d4519cfabd901208 +SIZE (biojava-1.5-beta2.tar.gz) = 28767548 MD5 (bytecode.jar) = 332e0b06b485645802067c92f1055e37 SHA256 (bytecode.jar) = 745bf5899361565f1a3572f19d4ae9c99354856d8a9f29bf52908650c0e9e48f SIZE (bytecode.jar) = 93463 diff --git a/biology/biojava/files/patch-build.xml b/biology/biojava/files/patch-build.xml index abce6b625052..ef7a6cb0b5d4 100644 --- a/biology/biojava/files/patch-build.xml +++ b/biology/biojava/files/patch-build.xml @@ -1,5 +1,5 @@ ---- build.xml.orig Thu Sep 7 11:18:13 2006 -+++ build.xml Sun Oct 22 12:43:18 2006 +--- build.xml.orig Fri Dec 29 14:12:28 2006 ++++ build.xml Wed Mar 21 16:14:38 2007 @@ -49,7 +49,7 @@ <property name="build.compiler" value="javac1.4" /> |