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| author | jrm <jrm@FreeBSD.org> | 2017-01-13 07:23:19 +0800 |
|---|---|---|
| committer | jrm <jrm@FreeBSD.org> | 2017-01-13 07:23:19 +0800 |
| commit | a43cdd9488a906fbd10fa6318bc5835a1a89df09 (patch) | |
| tree | 3706956c9c873eaf34f38ccaa2827588e2c3b864 /biology | |
| parent | e223661dc905146429875cb9d2fffaa3e5a5f466 (diff) | |
| download | freebsd-ports-gnome-a43cdd9488a906fbd10fa6318bc5835a1a89df09.tar.gz freebsd-ports-gnome-a43cdd9488a906fbd10fa6318bc5835a1a89df09.tar.zst freebsd-ports-gnome-a43cdd9488a906fbd10fa6318bc5835a1a89df09.zip | |
biology/diamond: Update to version 0.8.31.
Upstream changelog:
- Added compositional score adjustments (option --comp-based-stats
(0,1)). This is a useful feature for filtering false positive hits and
is enabled by default.
- Removed --single-domain option and replaced by --max-hsps, to set the
maximum number of Hsps per query/subject pair, to be consistent with
BLAST. This option is set to 1 by default as getting more than 1 Hsp
per subject seems to be confusing users.
- Added option --no-self-hits to filter identical self-hits.
Approved by: AMDmi3 (mentor)
Differential Revision: https://reviews.freebsd.org/D9134
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/diamond/Makefile | 2 | ||||
| -rw-r--r-- | biology/diamond/distinfo | 6 |
2 files changed, 4 insertions, 4 deletions
diff --git a/biology/diamond/Makefile b/biology/diamond/Makefile index ca3599924616..6a69b78b327a 100644 --- a/biology/diamond/Makefile +++ b/biology/diamond/Makefile @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= diamond -PORTVERSION= 0.8.30 +PORTVERSION= 0.8.31 DISTVERSIONPREFIX=v CATEGORIES= biology diff --git a/biology/diamond/distinfo b/biology/diamond/distinfo index 28033eec5b55..a591f6d495f8 100644 --- a/biology/diamond/distinfo +++ b/biology/diamond/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1483113104 -SHA256 (bbuchfink-diamond-v0.8.30_GH0.tar.gz) = ee138e4241c2712d6ce967785474312c52a45c6b56715b00e2abf759605e1fbb -SIZE (bbuchfink-diamond-v0.8.30_GH0.tar.gz) = 329097 +TIMESTAMP = 1484137862 +SHA256 (bbuchfink-diamond-v0.8.31_GH0.tar.gz) = b89fec7665346d80dd3e8e0c7fb599117cd0f6c9831cf568dd08bf9b894b075a +SIZE (bbuchfink-diamond-v0.8.31_GH0.tar.gz) = 335317 |