Remove expired ports:

2015-01-01 biology/boinc-simap: Project shutting down, see http://boincsimap.org/boincsimap/forum_thread.php?id=88
2015-01-01 security/openssh-portable-base: Overwrite-base option/port/pkg will be removed. There is no real need for foot-shooting.
2015-01-01 devel/cedet: Fails to build, use Emacs' builtin cedet package instead
2015-01-01 devel/ecb: does not work with newer Emacs versions, use the elpa package instead

7 files changed, 0 insertions, 166 deletions

diff --git a/biology/Makefile b/biology/Makefile
index a97f0d02f3af..db904901b26d 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -10,7 +10,6 @@
     SUBDIR += biococoa
     SUBDIR += biojava
     SUBDIR += blat
-    SUBDIR += boinc-simap
     SUBDIR += chemeq
     SUBDIR += clustalw
     SUBDIR += consed
diff --git a/biology/boinc-simap/Makefile b/biology/boinc-simap/Makefile
deleted file mode 100644
index af2e3069adff..000000000000
--- a/biology/boinc-simap/Makefile
+++ /dev/null
@@ -1,83 +0,0 @@
-# Created by: Pav Lucistnik <pav@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME=	boinc-simap
-PORTVERSION=	${SIMAP_VERSION}.${HMMER_VERSION}
-PORTREVISION=	7
-CATEGORIES=	biology
-MASTER_SITES=	http://boincsimap.org/boincsimap/download/
-DISTNAME=	${SIMAP_BINARY} ${HMMER_BINARY}
-EXTRACT_ONLY=	${HMMER_BINARY}
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	Similarity Matrix of Proteins project for BOINC
-
-DEPRECATED=	Project shutting down, see http://boincsimap.org/boincsimap/forum_thread.php?id=88
-EXPIRATION_DATE=2015-01-01
-
-LIB_DEPENDS=	libc.so.6:${PORTSDIR}/misc/compat6x
-RUN_DEPENDS=	boinc_client:${PORTSDIR}/net/boinc-client
-
-NO_BUILD=	yes
-NO_WRKSUBDIR=	yes
-STRIP=		#
-
-# these must match settings in ${PORTSDIR}/net/boinc-client/Makefile
-BOINC_CLIENT_USER?=	boinc
-BOINC_CLIENT_GROUP?=	nobody
-BOINC_CLIENT_HOME?=	/var/db/boinc
-
-SIMAP_SITE=	boincsimap.org_boincsimap
-SIMAP_BINARY=	simap_${SIMAP_VERSION}_${MACH}-pc-freebsd
-SIMAP_VERSION=	5.10
-HMMER_BINARY=	hmmer_${HMMER_VERSION}_${MACH}-pc-freebsd
-HMMER_VERSION=	5.09
-EXTRACT_AFTER_ARGS+=	--include=${HMMER_BINARY}
-
-PLIST_SUB=	SIMAP_BINARY=${SIMAP_BINARY} HMMER_BINARY=${HMMER_BINARY} \
-		SIMAP_SITE=${SIMAP_SITE} \
-		BOINC_CLIENT_HOME=${BOINC_CLIENT_HOME} \
-		BOINC_CLIENT_USER=${BOINC_CLIENT_USER} \
-		BOINC_CLIENT_GROUP=${BOINC_CLIENT_GROUP}
-
-ONLY_FOR_ARCHS=	i386 amd64
-
-OPTIONS_DEFINE=	SSE
-
-.include <bsd.port.options.mk>
-
-.if ${PORT_OPTIONS:MSSE}
-MACH=		i686
-.else
-MACH=		i386
-.endif
-
-.if ${ARCH} == amd64
-AMD64=		""
-.else
-AMD64=		"@comment "
-.endif
-
-SUB_FILES=	app_info.xml pkg-message
-SUB_LIST=	SIMAP_BINARY=${SIMAP_BINARY} HMMER_BINARY=${HMMER_BINARY} \
-		SIMAP_APPVERSION=${SIMAP_VERSION:S/.//} \
-		HMMER_APPVERSION=${HMMER_VERSION:S/.//} AMD64=${AMD64} \
-		BOINC_CLIENT_HOME=${BOINC_CLIENT_HOME}
-
-do-extract:
-	@${MKDIR} ${WRKDIR}
-	@${CP} ${DISTDIR}/${SIMAP_BINARY} ${WRKDIR}
-	@(cd ${WRKDIR} && ${EXTRACT_CMD} ${EXTRACT_BEFORE_ARGS} \
-	    ${DISTDIR}/${HMMER_BINARY}.tar.gz ${EXTRACT_AFTER_ARGS})
-
-do-install:
-	${INSTALL} -d ${STAGEDIR}${BOINC_CLIENT_HOME}/projects
-	${INSTALL} -d ${STAGEDIR}${BOINC_CLIENT_HOME}/projects/${SIMAP_SITE}
-	${INSTALL_DATA} ${WRKDIR}/app_info.xml \
-	    ${STAGEDIR}${BOINC_CLIENT_HOME}/projects/${SIMAP_SITE}
-.for APP in ${DISTNAME}
-	${INSTALL_PROGRAM} ${WRKDIR}/${APP} \
-	    ${STAGEDIR}${BOINC_CLIENT_HOME}/projects/${SIMAP_SITE}
-.endfor
-
-.include <bsd.port.mk>
diff --git a/biology/boinc-simap/distinfo b/biology/boinc-simap/distinfo
deleted file mode 100644
index 128bacae38c5..000000000000
--- a/biology/boinc-simap/distinfo
+++ /dev/null
@@ -1,8 +0,0 @@
-SHA256 (simap_5.10_i386-pc-freebsd) = 854cbf01a078958fc70df7eceb046ca0dc9fc48b8e145f5533a8ccc7d7402861
-SIZE (simap_5.10_i386-pc-freebsd) = 391012
-SHA256 (simap_5.10_i686-pc-freebsd) = 360e29dcc7705e16254f3b33a8e2183c57fa54fb539b0a117a6484852b726e30
-SIZE (simap_5.10_i686-pc-freebsd) = 349724
-SHA256 (hmmer_5.09_i386-pc-freebsd.tar.gz) = 2cb02e6eafcae3cd8bea74a71c794e715df30112eab5be7e6473a7507ed60288
-SIZE (hmmer_5.09_i386-pc-freebsd.tar.gz) = 581267
-SHA256 (hmmer_5.09_i686-pc-freebsd.tar.gz) = 90f048c17d0cd944ead4b57a5c6de4b397df76fd39b5976f933a9004b8bcf91e
-SIZE (hmmer_5.09_i686-pc-freebsd.tar.gz) = 617590
diff --git a/biology/boinc-simap/files/app_info.xml.in b/biology/boinc-simap/files/app_info.xml.in
deleted file mode 100644
index 52679280e47e..000000000000
--- a/biology/boinc-simap/files/app_info.xml.in
+++ /dev/null
@@ -1,32 +0,0 @@
-<app_info>
-    <app>
-        <name>simap</name>
-    </app>
-    <app>
-        <name>hmmer</name>
-    </app>
-    <file_info>
-        <name>%%SIMAP_BINARY%%</name>
-        <executable/>
-    </file_info>
-    <file_info>
-        <name>%%HMMER_BINARY%%</name>
-        <executable/>
-    </file_info>
-    <app_version>
-        <app_name>simap</app_name>
-        <version_num>%%SIMAP_APPVERSION%%</version_num>
-       <file_ref>
-            <file_name>%%SIMAP_BINARY%%</file_name>
-            <main_program/>
-        </file_ref>
-    </app_version>
-    <app_version>
-        <app_name>hmmer</app_name>
-        <version_num>%%HMMER_APPVERSION%%</version_num>
-       <file_ref>
-            <file_name>%%HMMER_BINARY%%</file_name>
-            <main_program/>
-        </file_ref>
-    </app_version>
-</app_info>
diff --git a/biology/boinc-simap/files/pkg-message.in b/biology/boinc-simap/files/pkg-message.in
deleted file mode 100644
index 06e72170e715..000000000000
--- a/biology/boinc-simap/files/pkg-message.in
+++ /dev/null
@@ -1,22 +0,0 @@
-*****************************************************************************
-ATTACHING PROJECT
-
-Just run boincmgr, choose Attach, and follow instructions.
-Project URL is boincsimap.org/boincsimap
-
-MANUAL INSTALLATION
- *) If this is your first time in any BOINC project, create a new account at
-    http://boincsimap.org/boincsimap/create_account_form.php
-
- *) Or get your account key at http://boincsimap.org/boincsimap/get_passwd.php
-
- *) Attach to the project:
-    cd %%BOINC_CLIENT_HOME%%
-    boinccmd --project_attach boincsimap.org/boincsimap <account key>
-*****************************************************************************
-%%AMD64%%  IMPORTANT NOTICE FOR AMD64 USERS:
-%%AMD64%%
-%%AMD64%% You have to have this line in /etc/libmap32.conf:
-%%AMD64%%   libpthread.so.2	libthr.so.2
-%%AMD64%% before you attach the project.  Otherwise it will not work.
-%%AMD64%%*****************************************************************************
diff --git a/biology/boinc-simap/pkg-descr b/biology/boinc-simap/pkg-descr
deleted file mode 100644
index 4a23c4ad7b35..000000000000
--- a/biology/boinc-simap/pkg-descr
+++ /dev/null
@@ -1,10 +0,0 @@
-SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculated
-protein similarities that plays a key role in many bioinformatics methods. It
-contains about all currently published protein sequences and is continuously
-updated.
-
-The computational effort for keeping SIMAP up-to-date is constantly increasing.
-Please help to update SIMAP by calculating protein similarities on your
-computer.
-
-WWW: http://boincsimap.org/boincsimap/
diff --git a/biology/boinc-simap/pkg-plist b/biology/boinc-simap/pkg-plist
deleted file mode 100644
index 5bc03c4c6227..000000000000
--- a/biology/boinc-simap/pkg-plist
+++ /dev/null
@@ -1,10 +0,0 @@
-@owner %%BOINC_CLIENT_USER%%
-@group %%BOINC_CLIENT_GROUP%%
-@dir %%BOINC_CLIENT_HOME%%
-@dir %%BOINC_CLIENT_HOME%%/projects
-@dir %%BOINC_CLIENT_HOME%%/projects/%%SIMAP_SITE%%
-%%BOINC_CLIENT_HOME%%/projects/%%SIMAP_SITE%%/app_info.xml
-%%BOINC_CLIENT_HOME%%/projects/%%SIMAP_SITE%%/%%SIMAP_BINARY%%
-%%BOINC_CLIENT_HOME%%/projects/%%SIMAP_SITE%%/%%HMMER_BINARY%%
-@owner root
-@group wheel