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| author | wen <wen@FreeBSD.org> | 2014-04-05 18:56:52 +0800 |
|---|---|---|
| committer | wen <wen@FreeBSD.org> | 2014-04-05 18:56:52 +0800 |
| commit | c4dbb3a1e6d8da6cf1d186643635ae25f783ec36 (patch) | |
| tree | 63d68aec1b6e834931a302bfd56fd862926bfb9e /biology | |
| parent | a3cddebe0868b918a0eb8884c2b2301c021ebd2a (diff) | |
| download | freebsd-ports-gnome-c4dbb3a1e6d8da6cf1d186643635ae25f783ec36.tar.gz freebsd-ports-gnome-c4dbb3a1e6d8da6cf1d186643635ae25f783ec36.tar.zst freebsd-ports-gnome-c4dbb3a1e6d8da6cf1d186643635ae25f783ec36.zip | |
- Update to 4.8
- Reset maintainer to ports@
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/paml/Makefile | 11 | ||||
| -rw-r--r-- | biology/paml/distinfo | 4 | ||||
| -rw-r--r-- | biology/paml/pkg-plist | 1 |
3 files changed, 8 insertions, 8 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile index 65e416280f80..906e11b4e5a0 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -2,20 +2,21 @@ # $FreeBSD$ PORTNAME= paml -PORTVERSION= 4.4c +PORTVERSION= 4.8 CATEGORIES= biology MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/ DISTNAME= ${PORTNAME}${PORTVERSION} +EXTRACT_SUFX= .tgz -MAINTAINER= wen@FreeBSD.org +MAINTAINER= ports@FreeBSD.org COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) USES= gmake -WRKSRC= ${WRKDIR}/${PORTNAME}44/src +WRKSRC= ${WRKDIR}/${PORTNAME}${PORTVERSION}/src MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" BINARIES= baseml basemlg chi2 codeml evolver pamp yn00 -DOC_FILES= MCMCtreeDoc.pdf pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt +DOC_FILES= pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt OPTIONS_DEFINE= DOCS @@ -25,7 +26,7 @@ do-install: .endfor @${MKDIR} ${STAGEDIR}${DOCSDIR} .for f in ${DOC_FILES} - ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}44/doc/${f} ${STAGEDIR}${DOCSDIR} + ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}${PORTVERSION}/doc/${f} ${STAGEDIR}${DOCSDIR} .endfor .include <bsd.port.mk> diff --git a/biology/paml/distinfo b/biology/paml/distinfo index 18d2e1004c93..585099df9353 100644 --- a/biology/paml/distinfo +++ b/biology/paml/distinfo @@ -1,2 +1,2 @@ -SHA256 (paml4.4c.tar.gz) = 08aad25b6b06a359d4f2f12a60ea601c95694864d5f29f7028f67b80890974d6 -SIZE (paml4.4c.tar.gz) = 2891715 +SHA256 (paml4.8.tgz) = 67498283308824cd5a3986db382bec275432e817f6719b8faf99fa2509f32781 +SIZE (paml4.8.tgz) = 4835110 diff --git a/biology/paml/pkg-plist b/biology/paml/pkg-plist index 5f2e3720b290..219d74d91e3d 100644 --- a/biology/paml/pkg-plist +++ b/biology/paml/pkg-plist @@ -6,7 +6,6 @@ bin/evolver bin/pamp bin/yn00 %%PORTDOCS%%%%DOCSDIR%%/pamlDOC.pdf -%%PORTDOCS%%%%DOCSDIR%%/MCMCtreeDoc.pdf %%PORTDOCS%%%%DOCSDIR%%/pamlFAQs.pdf %%PORTDOCS%%%%DOCSDIR%%/pamlHistory.txt %%PORTDOCS%%@dirrm %%DOCSDIR%% |