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| author | miwi <miwi@FreeBSD.org> | 2013-07-15 22:50:22 +0800 |
|---|---|---|
| committer | miwi <miwi@FreeBSD.org> | 2013-07-15 22:50:22 +0800 |
| commit | c7adc483393a3a8f868550ba5beff6f219de68c3 (patch) | |
| tree | 178e4e2e040ed4b6a08baa10289a146fdb066783 /biology | |
| parent | 659ecb11161c696769326dc6f192f097f9b893a8 (diff) | |
| download | freebsd-ports-gnome-c7adc483393a3a8f868550ba5beff6f219de68c3.tar.gz freebsd-ports-gnome-c7adc483393a3a8f868550ba5beff6f219de68c3.tar.zst freebsd-ports-gnome-c7adc483393a3a8f868550ba5beff6f219de68c3.zip | |
- Update to 6.2.06
PR: 180518
Submitted by: Ports Fury
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/tinker/Makefile | 5 | ||||
| -rw-r--r-- | biology/tinker/distinfo | 4 | ||||
| -rw-r--r-- | biology/tinker/files/patch-make__Makefile | 24 | ||||
| -rw-r--r-- | biology/tinker/pkg-plist | 3 |
4 files changed, 23 insertions, 13 deletions
diff --git a/biology/tinker/Makefile b/biology/tinker/Makefile index 3db597fbf307..64f4665c533d 100644 --- a/biology/tinker/Makefile +++ b/biology/tinker/Makefile @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= tinker -PORTVERSION= 6.2.05 +PORTVERSION= 6.2.06 CATEGORIES= biology MASTER_SITES= http://dasher.wustl.edu/tinker/downloads/ @@ -39,6 +39,9 @@ FFLAGS+= -mfancy-math-387 -malign-double post-extract: @${CHMOD} -R u+w ${WRKSRC} +pre-build: + @${RM} -f ${BUILD_WRKSRC}/*.c + post-install: @${MKDIR} ${DATADIR} (cd ${INSTALL_WRKSRC} && ${INSTALL_DATA} tinker.txt ${DATADIR}) diff --git a/biology/tinker/distinfo b/biology/tinker/distinfo index 9d2a2c3ec6bb..f0a7613dac6f 100644 --- a/biology/tinker/distinfo +++ b/biology/tinker/distinfo @@ -1,2 +1,2 @@ -SHA256 (tinker-6.2.05.tar.gz) = 73dcb0fff809bd38e8fbede896b778302ff1e89c90129ca30b54d773b2ea8e50 -SIZE (tinker-6.2.05.tar.gz) = 20246464 +SHA256 (tinker-6.2.06.tar.gz) = 6d5e79cd2a431787cd77bce2c469b7eec219f8e874425dcf8ebb74dabb0d985c +SIZE (tinker-6.2.06.tar.gz) = 20182802 diff --git a/biology/tinker/files/patch-make__Makefile b/biology/tinker/files/patch-make__Makefile index 3b7c2090ad5d..0fa8c9e795c2 100644 --- a/biology/tinker/files/patch-make__Makefile +++ b/biology/tinker/files/patch-make__Makefile @@ -53,18 +53,18 @@ ## ## Machine: Macintosh -@@ -595,6 +609,8 @@ +@@ -597,14 +611,13 @@ xyzpdb.x \ xyzsybyl.x +-%.o: %.f +- ${F77} ${F77FLAGS} ${OPTFLAGS} $< -o $@ +.SUFFIXES: .x -+ - .f.o: - ${F77} ${F77FLAGS} ${OPTFLAGS} $*.f -@@ -604,8 +620,8 @@ - server.o: - ${F77} ${F77FLAGS} ${OPTFLAGS} server.f +-%.o: %.c +- ${CC} ${CFLAGS} ${INCLUDEDIR} ${OPTFLAGS} $< ++.f.o: ++ ${F77} ${F77FLAGS} ${OPTFLAGS} $< -o $@ -%.x: %.o libtinker.a - ${F77} ${LINKFLAGS} -o $@ $^ ${LIBS}; strip $@ @@ -73,14 +73,19 @@ all: ${EXEFILES} -@@ -616,66 +632,66 @@ - cat *.i *.f *.c > tinker.txt +@@ -612,70 +625,70 @@ + rm -f *.o *.a *.x + + listing: +- cat *.i *.f *.c > tinker.txt ++ cat *.i *.f > tinker.txt rename: - mv alchemy.x $(BINDIR)/alchemy - mv analyze.x $(BINDIR)/analyze - mv anneal.x $(BINDIR)/anneal - mv archive.x $(BINDIR)/archive +- mv bar.x $(BINDIR)/bar - mv correlate.x $(BINDIR)/correlate - mv crystal.x $(BINDIR)/crystal - mv diffuse.x $(BINDIR)/diffuse @@ -141,6 +146,7 @@ + ${BSD_INSTALL_PROGRAM} analyze.x $(BINDIR)/analyze + ${BSD_INSTALL_PROGRAM} anneal.x $(BINDIR)/anneal + ${BSD_INSTALL_PROGRAM} archive.x $(BINDIR)/archive ++ ${BSD_INSTALL_PROGRAM} bar.x $(BINDIR)/bar + ${BSD_INSTALL_PROGRAM} correlate.x $(BINDIR)/correlate + ${BSD_INSTALL_PROGRAM} crystal.x $(BINDIR)/crystal + ${BSD_INSTALL_PROGRAM} diffuse.x $(BINDIR)/diffuse diff --git a/biology/tinker/pkg-plist b/biology/tinker/pkg-plist index 8e28b77a4292..2a034a061e4f 100644 --- a/biology/tinker/pkg-plist +++ b/biology/tinker/pkg-plist @@ -2,6 +2,7 @@ bin/alchemy bin/analyze bin/anneal bin/archive +bin/bar bin/correlate bin/crystal bin/diffuse @@ -156,6 +157,7 @@ bin/xyzsybyl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/copper.xyz %%PORTEXAMPLES%%%%EXAMPLESDIR%%/cpentene.key %%PORTEXAMPLES%%%%EXAMPLESDIR%%/cpentene.xyz +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/crambin.dyn %%PORTEXAMPLES%%%%EXAMPLESDIR%%/crambin.key %%PORTEXAMPLES%%%%EXAMPLESDIR%%/crambin.pdb %%PORTEXAMPLES%%%%EXAMPLESDIR%%/crambin.seq @@ -279,7 +281,6 @@ bin/xyzsybyl %%PORTEXAMPLES%%%%EXAMPLESDIR%%/melittin.xyz %%PORTEXAMPLES%%%%EXAMPLESDIR%%/membrane.key %%PORTEXAMPLES%%%%EXAMPLESDIR%%/membrane.xyz -%%PORTEXAMPLES%%%%EXAMPLESDIR%%/meohbox.dyn %%PORTEXAMPLES%%%%EXAMPLESDIR%%/meohbox.key %%PORTEXAMPLES%%%%EXAMPLESDIR%%/meohbox.xyz %%PORTEXAMPLES%%%%EXAMPLESDIR%%/methane.int |