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authormiwi <miwi@FreeBSD.org>2017-04-22 17:25:44 +0800
committermiwi <miwi@FreeBSD.org>2017-04-22 17:25:44 +0800
commitd9c78af5af2193eba5399d0f831c2a598bc47212 (patch)
treee91c9a8c6f2b89cd24bbaaf5787f222813e4a7b5 /biology
parenta8b98c0bf3887cd7cfe2ec4ec0c1ea4fe6493e62 (diff)
downloadfreebsd-ports-gnome-d9c78af5af2193eba5399d0f831c2a598bc47212.tar.gz
freebsd-ports-gnome-d9c78af5af2193eba5399d0f831c2a598bc47212.tar.zst
freebsd-ports-gnome-d9c78af5af2193eba5399d0f831c2a598bc47212.zip
- Fix shebangs
Diffstat (limited to 'biology')
-rw-r--r--biology/bowtie/Makefile7
1 files changed, 4 insertions, 3 deletions
diff --git a/biology/bowtie/Makefile b/biology/bowtie/Makefile
index 991393a072d1..8d419e80cf16 100644
--- a/biology/bowtie/Makefile
+++ b/biology/bowtie/Makefile
@@ -3,7 +3,7 @@
PORTNAME= bowtie
PORTVERSION= 1.1.2
-PORTREVISION= 2
+PORTREVISION= 3
DISTVERSIONPREFIX= v
CATEGORIES= biology
@@ -17,9 +17,10 @@ ONLY_FOR_ARCHS= amd64
# FIXME: bowtie-align intermittently dumps core when compiled with clang
# GCC 4.2 does not provide good performance
USE_GCC= yes
-USES= gmake perl5 shebangfix
+USES= gmake perl5 python:run shebangfix
USE_PERL5= run
-SHEBANG_FILES= scripts/*.pl
+SHEBANG_FILES= scripts/*.pl bowtie bowtie-build \
+ bowtie-inspect
USE_GITHUB= yes
GH_ACCOUNT= BenLangmead