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author | sunpoet <sunpoet@FreeBSD.org> | 2011-10-03 01:03:33 +0800 |
---|---|---|
committer | sunpoet <sunpoet@FreeBSD.org> | 2011-10-03 01:03:33 +0800 |
commit | f0c41e18ad1e993007f2e27484e823b0a1125121 (patch) | |
tree | 1623430b6f4d73b808380c1769ffbb8f3cadce6a /biology | |
parent | 3bf8b1e6c12842290456b821f6a47fb3e6a0f1ec (diff) | |
download | freebsd-ports-gnome-f0c41e18ad1e993007f2e27484e823b0a1125121.tar.gz freebsd-ports-gnome-f0c41e18ad1e993007f2e27484e823b0a1125121.tar.zst freebsd-ports-gnome-f0c41e18ad1e993007f2e27484e823b0a1125121.zip |
- Update to 2.25
- Sort MAN3 and PLIST
- Pet portlint
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes
Diffstat (limited to 'biology')
-rw-r--r-- | biology/p5-Bio-Graphics/Makefile | 18 | ||||
-rw-r--r-- | biology/p5-Bio-Graphics/distinfo | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Graphics/pkg-plist | 23 |
3 files changed, 23 insertions, 22 deletions
diff --git a/biology/p5-Bio-Graphics/Makefile b/biology/p5-Bio-Graphics/Makefile index 646be2478323..dfe92d65771c 100644 --- a/biology/p5-Bio-Graphics/Makefile +++ b/biology/p5-Bio-Graphics/Makefile @@ -6,7 +6,7 @@ # PORTNAME= Bio-Graphics -PORTVERSION= 2.24 +PORTVERSION= 2.25 CATEGORIES= biology perl5 MASTER_SITES= CPAN PKGNAMEPREFIX= p5- @@ -14,28 +14,23 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Generate GD Images of Bio::Seq Objects -LICENSE_COMB= dual LICENSE= ART20 GPLv1 +LICENSE_COMB= dual -RUN_DEPENDS= p5-Bio-SCF>=1.01:${PORTSDIR}/biology/p5-Bio-SCF \ +BUILD_DEPENDS= p5-Bio-SCF>=1.01:${PORTSDIR}/biology/p5-Bio-SCF \ p5-GD>=2.3:${PORTSDIR}/graphics/p5-GD \ p5-GD-SVG>=0.32:${PORTSDIR}/graphics/p5-GD-SVG \ p5-Statistics-Descriptive>=2.6:${PORTSDIR}/math/p5-Statistics-Descriptive \ p5-bioperl>=1.6.0:${PORTSDIR}/biology/p5-bioperl +RUN_DEPENDS:= ${BUILD_DEPENDS} -BUILD_DEPENDS:= ${RUN_DEPENDS} - -PERL_MODBUILD= YES +PERL_CONFIGURE= yes MAN1= contig_draw.pl.1 \ feature_draw.pl.1 \ frend.pl.1 \ search_overview.pl.1 - MAN3= Bio::Graphics.3 \ - Bio::Graphics::Glyph::transcript2.3 \ - Bio::Graphics::Glyph::extending_arrow.3 \ - Bio::Graphics::Wiggle.3 \ Bio::Graphics::ConfiguratorI.3 \ Bio::Graphics::DrawTransmembrane.3 \ Bio::Graphics::Feature.3 \ @@ -61,6 +56,7 @@ MAN3= Bio::Graphics.3 \ Bio::Graphics::Glyph::dumbbell.3 \ Bio::Graphics::Glyph::ellipse.3 \ Bio::Graphics::Glyph::ex.3 \ + Bio::Graphics::Glyph::extending_arrow.3 \ Bio::Graphics::Glyph::fixedwidth.3 \ Bio::Graphics::Glyph::flag.3 \ Bio::Graphics::Glyph::gene.3 \ @@ -112,6 +108,7 @@ MAN3= Bio::Graphics.3 \ Bio::Graphics::Glyph::trace.3 \ Bio::Graphics::Glyph::track.3 \ Bio::Graphics::Glyph::transcript.3 \ + Bio::Graphics::Glyph::transcript2.3 \ Bio::Graphics::Glyph::translation.3 \ Bio::Graphics::Glyph::triangle.3 \ Bio::Graphics::Glyph::two_bolts.3 \ @@ -127,6 +124,7 @@ MAN3= Bio::Graphics.3 \ Bio::Graphics::Pictogram.3 \ Bio::Graphics::RendererI.3 \ Bio::Graphics::Util.3 \ + Bio::Graphics::Wiggle.3 \ Bio::Graphics::Wiggle::Loader.3 .include <bsd.port.mk> diff --git a/biology/p5-Bio-Graphics/distinfo b/biology/p5-Bio-Graphics/distinfo index 0da3da40c8a8..b891885557ad 100644 --- a/biology/p5-Bio-Graphics/distinfo +++ b/biology/p5-Bio-Graphics/distinfo @@ -1,2 +1,2 @@ -SHA256 (Bio-Graphics-2.24.tar.gz) = e6078ebe10c5e0f4a6d4fff42cb25f04c99945406e70d692b7deb803f6e39df2 -SIZE (Bio-Graphics-2.24.tar.gz) = 860229 +SHA256 (Bio-Graphics-2.25.tar.gz) = 1a189bb5d24672f6ee09d977d44fcb9506f882001b886825839e4a0fd3af559b +SIZE (Bio-Graphics-2.25.tar.gz) = 861909 diff --git a/biology/p5-Bio-Graphics/pkg-plist b/biology/p5-Bio-Graphics/pkg-plist index d9fc63ac6079..bfcf73fefd19 100644 --- a/biology/p5-Bio-Graphics/pkg-plist +++ b/biology/p5-Bio-Graphics/pkg-plist @@ -1,3 +1,9 @@ +bin/contig_draw.pl +bin/feature_draw.pl +bin/frend.pl +bin/glyph_help.pl +bin/render_msa.pl +bin/search_overview.pl %%SITE_PERL%%/Bio/Graphics.pm %%SITE_PERL%%/Bio/Graphics/ConfiguratorI.pm %%SITE_PERL%%/Bio/Graphics/DrawTransmembrane.pm @@ -100,14 +106,11 @@ %%SITE_PERL%%/Bio/Graphics/Util.pm %%SITE_PERL%%/Bio/Graphics/Wiggle.pm %%SITE_PERL%%/Bio/Graphics/Wiggle/Loader.pm -bin/contig_draw.pl -bin/feature_draw.pl -bin/frend.pl -bin/glyph_help.pl -bin/render_msa.pl -bin/search_overview.pl -@dirrmtry %%SITE_PERL%%/Bio/Graphics/Wiggle -@dirrmtry %%SITE_PERL%%/Bio/Graphics/Glyph -@dirrmtry %%SITE_PERL%%/Bio/Graphics/FeatureFile -@dirrmtry %%SITE_PERL%%/Bio/Graphics +%%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/Graphics/.packlist +@dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/Graphics +@dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio +@dirrm %%SITE_PERL%%/Bio/Graphics/Wiggle +@dirrm %%SITE_PERL%%/Bio/Graphics/Glyph +@dirrm %%SITE_PERL%%/Bio/Graphics/FeatureFile +@dirrm %%SITE_PERL%%/Bio/Graphics @dirrmtry %%SITE_PERL%%/Bio |