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authoraaron <aaron@FreeBSD.org>2006-05-20 07:18:32 +0800
committeraaron <aaron@FreeBSD.org>2006-05-20 07:18:32 +0800
commit4dafa3449b823c895b680aa5a9f9d8c6bcfce03c (patch)
tree06f25464b111437785a50aa6371d473e55efff68 /devel/cvsspam
parent5fc42c951f9c0262d4e4cd58650812527a0a0610 (diff)
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- Updated from 0.07 to 0.12
Approved by: tobez (implicit) 0.08 20/Feb/2006 15:14 Improved referential integrity between nodes, taxa, and data. Implemented Fastnexus parser Node object silently implements Bio::Tree::NodeI interface if BioPerl is installed Tree object silently implements Bio::Tree::TreeI interface if BioPerl is installed Added convertor methods for XML and CIPRES Implemented more Matrix methods Implemented symbol tables in Bio::Phylo::Util::CONSTANT Implemented visit method for listable objects Implemented caching infrastructure for calculations Changed object-model to inside-out arrays Added Biodiversity measures code by Aki Mimoto Moved constants and exceptions to Bio::Phylo::Util::* Fixed memory leak due to circular references
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