update to 0.99.0a

PR:		16925
Submitted by:	maintainer

3 files changed, 2345 insertions, 1579 deletions

diff --git a/math/R/Makefile b/math/R/Makefile
index 85d7324976c5..b238ad070439 100644
--- a/math/R/Makefile
+++ b/math/R/Makefile
@@ -1,13 +1,13 @@
 # New ports collection makefile for:	R (letter)
-# Version required:		R-0.64.2
-# Date created:			Tue Jun 23 07:36:55 EST 1998
+# Version required:		R-0.99.0a
+# Date created:			Wed Feb 23 13:39:51 EST 2000
 # Whom:				Maurice Castro <maurice@serc.rmit.edu.au>
 #
 # $FreeBSD$
 #
 
-DISTNAME=	R-0.64.2
-PKGNAME=	R-${PAPERSIZE}-0.64.2
+DISTNAME=	R-0.99.0a
+PKGNAME=	R-${PAPERSIZE}-0.99.0a
 CATEGORIES=	math
 MASTER_SITES=	http://lib.stat.cmu.edu/R/CRAN/src/base/ \
 		ftp://ftp.biostat.washington.edu/mirrors/R/CRAN/src/base/ \
@@ -38,9 +38,7 @@ PAPERSIZE?=	letter
 
 ALL_TARGET=all help html
 
-MAN1=	R.1 Rd2txt.1 Rdconv.1
-MLINKS=	Rdconv.1 Sd2Rd.1 \
-	Rdconv.1 Rdindex.1
+MAN1=	R.1
 
 test:
 	@(cd ${WRKSRC}; make test-All)
diff --git a/math/R/distinfo b/math/R/distinfo
index d219cfcdbf3c..c3cc97a7a52d 100644
--- a/math/R/distinfo
+++ b/math/R/distinfo
@@ -1 +1 @@
-MD5 (R-0.64.2.tgz) = a25197e6ed875628de6bb9fc6ce34fe4
+MD5 (R-0.99.0a.tgz) = 68dc7bddc8a972784c66d8b7838d5245
diff --git a/math/R/pkg-plist b/math/R/pkg-plist
index 9f50e3ec2e82..ac8e3589fc53 100644
--- a/math/R/pkg-plist
+++ b/math/R/pkg-plist
@@ -1,9 +1,5 @@
 bin/R
-bin/Rd2txt
-bin/Rdconv
-bin/Rdindex
-bin/Sd2Rd
-lib/R/bin/R.binary
+lib/R/bin/R.X11
 lib/R/bin/R
 lib/R/bin/BATCH
 lib/R/bin/COMPILE
@@ -17,6 +13,7 @@ lib/R/bin/Rdindex
 lib/R/bin/Rman2Rd
 lib/R/bin/SHLIB
 lib/R/bin/Sd2Rd
+lib/R/bin/build
 lib/R/bin/build-help
 lib/R/bin/check
 lib/R/bin/filename
@@ -24,45 +21,1841 @@ lib/R/bin/fwf2table
 lib/R/bin/help
 lib/R/bin/help.links
 lib/R/bin/help.pretty
-lib/R/bin/html2dos
+lib/R/bin/maketitle
 lib/R/bin/massage-Examples
 lib/R/bin/pager
-lib/R/include/Applic.h
-lib/R/include/Arith.h
-lib/R/include/Blas.h
-lib/R/include/Complex.h
-lib/R/include/Error.h
-lib/R/include/Errormsg.h
-lib/R/include/Fortran.h
-lib/R/include/Linpack.h
-lib/R/include/Mathlib.h
-lib/R/include/Memory.h
-lib/R/include/Platform.h
-lib/R/include/PrtUtil.h
-lib/R/include/Random.h
+lib/R/include/R_ext/Applic.h
+lib/R/include/R_ext/Arith.h
+lib/R/include/R_ext/Complex.h
+lib/R/include/R_ext/Constants.h
+lib/R/include/R_ext/Error.h
+lib/R/include/R_ext/Linpack.h
+lib/R/include/R_ext/Mathlib.h
+lib/R/include/R_ext/Memory.h
+lib/R/include/R_ext/PrtUtil.h
+lib/R/include/R_ext/RS.h
+lib/R/include/R_ext/Random.h
+lib/R/include/R_ext/Utils.h
+lib/R/include/R_ext/f2c.h
+lib/R/include/R.h
+lib/R/include/Rconfig.h
+lib/R/include/Rdefines.h
 lib/R/include/Rinternals.h
+lib/R/include/Rversion.h
 lib/R/include/S.h
 lib/R/include/S_compat.h
-lib/R/include/Utils.h
-lib/R/include/f2c.h
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 lib/R/library/base/data/airmiles.R
 lib/R/library/base/data/airquality.tab
 lib/R/library/base/data/anscombe.R
 lib/R/library/base/data/attenu.R
 lib/R/library/base/data/attitude.R
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 lib/R/library/base/data/cars.R
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 lib/R/library/base/data/discoveries.R
 lib/R/library/base/data/esoph.R
 lib/R/library/base/data/euro.R
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 lib/R/library/base/data/presidents.R
 lib/R/library/base/data/pressure.R
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 lib/R/library/base/data/randu.R
 lib/R/library/base/data/rivers.R
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 lib/R/library/base/data/sleep.R
 lib/R/library/base/data/stackloss.R
 lib/R/library/base/data/state.R
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 lib/R/library/base/data/warpbreaks.R
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 lib/R/library/base/help/00Titles
 lib/R/library/base/help/Arithmetic
-lib/R/library/base/help/BATCH
 lib/R/library/base/help/Bessel
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 lib/R/library/base/help/Binomial
-lib/R/library/base/help/COMPILE
 lib/R/library/base/help/Cauchy
 lib/R/library/base/help/Chisquare
 lib/R/library/base/help/Comparison
@@ -119,13 +1905,17 @@ lib/R/library/base/help/Extract
 lib/R/library/base/help/Extremes
 lib/R/library/base/help/FDist
 lib/R/library/base/help/Foreign
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 lib/R/library/base/help/GammaDist
 lib/R/library/base/help/Geometric
+lib/R/library/base/help/HairEyeColor
 lib/R/library/base/help/Hyperbolic
 lib/R/library/base/help/Hypergeometric
-lib/R/library/base/help/INSTALL
 lib/R/library/base/help/IQR
+lib/R/library/base/help/InsectSprays
 lib/R/library/base/help/Internal
+lib/R/library/base/help/Last.value
+lib/R/library/base/help/LifeCycleSavings
 lib/R/library/base/help/Log
 lib/R/library/base/help/Logic
 lib/R/library/base/help/Logistic
@@ -133,40 +1923,50 @@ lib/R/library/base/help/Lognormal
 lib/R/library/base/help/Math
 lib/R/library/base/help/Memory
 lib/R/library/base/help/NA
-lib/R/library/base/help/NChisquare
 lib/R/library/base/help/NULL
 lib/R/library/base/help/NegBinomial
 lib/R/library/base/help/Normal
+lib/R/library/base/help/OrchardSprays
+lib/R/library/base/help/Paren
+lib/R/library/base/help/PlantGrowth
+lib/R/library/base/help/Platform
 lib/R/library/base/help/Poisson
 lib/R/library/base/help/Primitive
-lib/R/library/base/help/REMOVE
-lib/R/library/base/help/RHOME
+lib/R/library/base/help/Random-user
 lib/R/library/base/help/Random
 lib/R/library/base/help/Recall
+lib/R/library/base/help/Rhome
 lib/R/library/base/help/Round
-lib/R/library/base/help/SHLIB
 lib/R/library/base/help/SignRank
 lib/R/library/base/help/Special
 lib/R/library/base/help/Startup
 lib/R/library/base/help/TDist
+lib/R/library/base/help/Titanic
+lib/R/library/base/help/ToothGrowth
 lib/R/library/base/help/Trig
 lib/R/library/base/help/Tukey
+lib/R/library/base/help/UCBAdmissions
+lib/R/library/base/help/USArrests
+lib/R/library/base/help/USJudgeRatings
+lib/R/library/base/help/USPersonalExpenditure
 lib/R/library/base/help/Uniform
+lib/R/library/base/help/VADeaths
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 lib/R/library/base/help/Weibull
 lib/R/library/base/help/Wilcoxon
 lib/R/library/base/help/abbreviate
 lib/R/library/base/help/abline
-lib/R/library/base/help/acid
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 lib/R/library/base/help/aggregate
 lib/R/library/base/help/airmiles
 lib/R/library/base/help/airquality
 lib/R/library/base/help/alias
 lib/R/library/base/help/all
+lib/R/library/base/help/all.equal
 lib/R/library/base/help/allnames
 lib/R/library/base/help/anova
 lib/R/library/base/help/anscombe
+lib/R/library/base/help/any
 lib/R/library/base/help/aov
 lib/R/library/base/help/aperm
 lib/R/library/base/help/append
@@ -176,6 +1976,7 @@ lib/R/library/base/help/apropos
 lib/R/library/base/help/args
 lib/R/library/base/help/array
 lib/R/library/base/help/arrows
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 lib/R/library/base/help/assign
 lib/R/library/base/help/attach
@@ -188,25 +1989,27 @@ lib/R/library/base/help/ave
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 lib/R/library/base/help/backsolve
 lib/R/library/base/help/barplot
-lib/R/library/base/help/bees
 lib/R/library/base/help/body
 lib/R/library/base/help/box
 lib/R/library/base/help/boxplot
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 lib/R/library/base/help/boxplot.stats
 lib/R/library/base/help/browser
-lib/R/library/base/help/bug.report
 lib/R/library/base/help/bxp
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 lib/R/library/base/help/c
 lib/R/library/base/help/call
 lib/R/library/base/help/cars
 lib/R/library/base/help/case.names
 lib/R/library/base/help/cat
 lib/R/library/base/help/cbind
+lib/R/library/base/help/char.expand
 lib/R/library/base/help/character
 lib/R/library/base/help/charmatch
 lib/R/library/base/help/check.options
 lib/R/library/base/help/chickwts
-lib/R/library/base/help/chisq.test
 lib/R/library/base/help/chol
 lib/R/library/base/help/chol2inv
 lib/R/library/base/help/chull
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 lib/R/library/base/help/coefficients
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 lib/R/library/base/help/colnames
 lib/R/library/base/help/colors
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 lib/R/library/base/help/complex
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-lib/R/library/base/help/consume
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 lib/R/library/base/help/contrast
 lib/R/library/base/help/contrasts
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 lib/R/library/base/help/cumsum
 lib/R/library/base/help/curve
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 lib/R/library/base/help/dataentry
-lib/R/library/base/help/deaths
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 lib/R/library/base/help/debug
 lib/R/library/base/help/delay
 lib/R/library/base/help/delete.response
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 lib/R/library/base/help/dev2
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 lib/R/library/base/help/deviance
 lib/R/library/base/help/df.residual
 lib/R/library/base/help/diag
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 lib/R/library/base/help/dotplot
 lib/R/library/base/help/double
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 lib/R/library/base/help/dput
 lib/R/library/base/help/drop
 lib/R/library/base/help/dummy.coef
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 lib/R/library/base/help/edit
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 lib/R/library/base/help/effects
 lib/R/library/base/help/eigen
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 lib/R/library/base/help/family
 lib/R/library/base/help/fft
 lib/R/library/base/help/file
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 lib/R/library/base/help/file.show
 lib/R/library/base/help/filled.contour
 lib/R/library/base/help/fitted.values
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 lib/R/library/base/help/get
 lib/R/library/base/help/getenv
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 lib/R/library/base/help/gl
 lib/R/library/base/help/glm
 lib/R/library/base/help/glm.summaries
 lib/R/library/base/help/gray
 lib/R/library/base/help/grep
 lib/R/library/base/help/grid
-lib/R/library/base/help/hdf5
 lib/R/library/base/help/help
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 lib/R/library/base/help/hist
 lib/R/library/base/help/hsv
+lib/R/library/base/help/httpclient
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 lib/R/library/base/help/ifelse
 lib/R/library/base/help/image
 lib/R/library/base/help/index.search
 lib/R/library/base/help/infert
 lib/R/library/base/help/influence.measures
-lib/R/library/base/help/insects
 lib/R/library/base/help/integer
 lib/R/library/base/help/interaction
 lib/R/library/base/help/interactive
 lib/R/library/base/help/invisible
 lib/R/library/base/help/iris
-lib/R/library/base/help/isR
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 lib/R/library/base/help/is.finite
 lib/R/library/base/help/is.function
 lib/R/library/base/help/is.language
+lib/R/library/base/help/is.object
 lib/R/library/base/help/is.recursive
 lib/R/library/base/help/is.single
+lib/R/library/base/help/is.symbol
+lib/R/library/base/help/isR
 lib/R/library/base/help/islands
 lib/R/library/base/help/jitter
-lib/R/library/base/help/judges
 lib/R/library/base/help/kappa
 lib/R/library/base/help/kronecker
 lib/R/library/base/help/labels
@@ -356,6 +2167,7 @@ lib/R/library/base/help/lines
 lib/R/library/base/help/list
 lib/R/library/base/help/list.files
 lib/R/library/base/help/lm
+lib/R/library/base/help/ls
 lib/R/library/base/help/lm.influence
 lib/R/library/base/help/lm.summaries
 lib/R/library/base/help/load
@@ -365,18 +2177,17 @@ lib/R/library/base/help/loglin
 lib/R/library/base/help/longley
 lib/R/library/base/help/lower.tri
 lib/R/library/base/help/lowess
-lib/R/library/base/help/ls
 lib/R/library/base/help/ls.diag
 lib/R/library/base/help/ls.print
 lib/R/library/base/help/lsfit
 lib/R/library/base/help/machine
-lib/R/library/base/help/macintosh
 lib/R/library/base/help/mad
 lib/R/library/base/help/mahalanobis
 lib/R/library/base/help/make.link
 lib/R/library/base/help/make.names
 lib/R/library/base/help/make.socket
 lib/R/library/base/help/make.tables
+lib/R/library/base/help/margin.table
 lib/R/library/base/help/mat.or.vec
 lib/R/library/base/help/match
 lib/R/library/base/help/match.arg
@@ -387,6 +2198,7 @@ lib/R/library/base/help/matplot
 lib/R/library/base/help/matrix
 lib/R/library/base/help/mean
 lib/R/library/base/help/median
+lib/R/library/base/help/memory.profile
 lib/R/library/base/help/menu
 lib/R/library/base/help/methods
 lib/R/library/base/help/missing
@@ -414,36 +2226,42 @@ lib/R/library/base/help/nrow
 lib/R/library/base/help/numeric
 lib/R/library/base/help/offset
 lib/R/library/base/help/on.exit
+lib/R/library/base/help/optim
 lib/R/library/base/help/optimize
 lib/R/library/base/help/options
 lib/R/library/base/help/order
 lib/R/library/base/help/outer
-lib/R/library/base/help/par
+lib/R/library/base/help/p.adjust
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 lib/R/library/base/help/page
 lib/R/library/base/help/pairs
 lib/R/library/base/help/pairs.formula
 lib/R/library/base/help/palette
 lib/R/library/base/help/palettes
 lib/R/library/base/help/panel.smooth
+lib/R/library/base/help/par
 lib/R/library/base/help/parse
+lib/R/library/base/help/parse.dcf
 lib/R/library/base/help/paste
 lib/R/library/base/help/persp
 lib/R/library/base/help/phones
 lib/R/library/base/help/pictex
 lib/R/library/base/help/piechart
-lib/R/library/base/help/pigs
-lib/R/library/base/help/plants
 lib/R/library/base/help/plot
+lib/R/library/base/help/plot.lm
 lib/R/library/base/help/plot.window
 lib/R/library/base/help/plot.xy
+lib/R/library/base/help/pmatch
 lib/R/library/base/help/plotdefault
 lib/R/library/base/help/plotfactor
 lib/R/library/base/help/plotformula
-lib/R/library/base/help/pmatch
+lib/R/library/base/help/plotmath
 lib/R/library/base/help/points
 lib/R/library/base/help/poly
 lib/R/library/base/help/polygon
 lib/R/library/base/help/polyroot
+lib/R/library/base/help/pos.to.env
 lib/R/library/base/help/postscript
 lib/R/library/base/help/power
 lib/R/library/base/help/ppoints
@@ -451,6 +2269,7 @@ lib/R/library/base/help/precip
 lib/R/library/base/help/predict
 lib/R/library/base/help/predict.glm
 lib/R/library/base/help/predict.lm
+lib/R/library/base/help/preplot
 lib/R/library/base/help/presidents
 lib/R/library/base/help/pressure
 lib/R/library/base/help/pretty
@@ -460,9 +2279,11 @@ lib/R/library/base/help/print.default
 lib/R/library/base/help/print.matrix
 lib/R/library/base/help/proc.time
 lib/R/library/base/help/prod
+lib/R/library/base/help/profile
 lib/R/library/base/help/proj
 lib/R/library/base/help/prompt
-lib/R/library/base/help/prop.test
+lib/R/library/base/help/prompt.data.frame
+lib/R/library/base/help/prop.table
 lib/R/library/base/help/qqnorm
 lib/R/library/base/help/qr
 lib/R/library/base/help/qraux
@@ -471,10 +2292,12 @@ lib/R/library/base/help/quantile
 lib/R/library/base/help/quit
 lib/R/library/base/help/randu
 lib/R/library/base/help/range
+lib/R/library/base/help/range.default
 lib/R/library/base/help/rank
 lib/R/library/base/help/read.fwf
 lib/R/library/base/help/read.socket
 lib/R/library/base/help/read.table
+lib/R/library/base/help/read.table.url
 lib/R/library/base/help/readline
 lib/R/library/base/help/real
 lib/R/library/base/help/rect
@@ -483,6 +2306,7 @@ lib/R/library/base/help/rep
 lib/R/library/base/help/replace
 lib/R/library/base/help/replications
 lib/R/library/base/help/residuals
+lib/R/library/base/help/restart
 lib/R/library/base/help/rev
 lib/R/library/base/help/rgb
 lib/R/library/base/help/rivers
@@ -493,24 +2317,28 @@ lib/R/library/base/help/rowsum
 lib/R/library/base/help/rug
 lib/R/library/base/help/sample
 lib/R/library/base/help/save
-lib/R/library/base/help/savings
 lib/R/library/base/help/scale
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 lib/R/library/base/help/screen
 lib/R/library/base/help/sd
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 lib/R/library/base/help/seq
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 lib/R/library/base/help/stat.anova
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 lib/R/library/base/help/stem
@@ -526,6 +2354,7 @@ lib/R/library/base/help/substitute
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 lib/R/library/base/help/sum
 lib/R/library/base/help/summary
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 lib/R/library/base/help/sunspots
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 lib/R/library/base/help/sweep
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 lib/R/library/base/help/symnum
 lib/R/library/base/help/sys.parent
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 lib/R/library/base/help/system.time
 lib/R/library/base/help/t
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 lib/R/library/base/help/tabulate
 lib/R/library/base/help/tapply
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 lib/R/library/base/help/tempfile
 lib/R/library/base/help/terms
 lib/R/library/base/help/text
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 lib/R/library/base/help/trees
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 lib/R/library/base/help/volcano
 lib/R/library/base/help/warning
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 lib/R/library/LibIndex
 lib/R/afm/agd_____.lt1
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+@dirrm lib/R/library/ts/R-ex
+@dirrm lib/R/library/ts/latex
+@dirrm lib/R/library/ts/html
+@dirrm lib/R/library/ts/help
+@dirrm lib/R/library/ts/data
+@dirrm lib/R/library/ts/libs
+@dirrm lib/R/library/ts
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 @dirrm lib/R/doc/manual
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+@dirrm lib/R/include/R_ext
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