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authorkris <kris@FreeBSD.org>2004-09-26 10:50:35 +0800
committerkris <kris@FreeBSD.org>2004-09-26 10:50:35 +0800
commitdc8d87b6177c8ba789886c7ff3400a1e0b60d718 (patch)
tree54cb1c4b3e94d0e7b51882faa1b8767be18ede33 /multimedia/vlc-devel/distinfo
parent6424fd5192e6e888303ce266ccb6b88a31cd3003 (diff)
downloadfreebsd-ports-gnome-dc8d87b6177c8ba789886c7ff3400a1e0b60d718.tar.gz
freebsd-ports-gnome-dc8d87b6177c8ba789886c7ff3400a1e0b60d718.tar.zst
freebsd-ports-gnome-dc8d87b6177c8ba789886c7ff3400a1e0b60d718.zip
BROKEN on 5.x: Does not compile
Approved by: portmgr (self)
Diffstat (limited to 'multimedia/vlc-devel/distinfo')
0 files changed, 0 insertions, 0 deletions
biology?id=923d173f4818f7b2c14117514660521b6be7e985'>biology/py-pysam: Update 0.15.1 -> 0.15.2yuri2019-01-262-4/+4 * Sort categories Makefiles.mat2019-01-231-1/+1 * Fix Qt5 symbol version scripts to put the catch-all clause first. Whentijl2019-01-163-2/+3 * biology/stacks: Upgrade to 2.3jwb2019-01-124-38/+14 * New port: biology/hisat2: Program for mapping next-generation sequencing readsjwb2019-01-127-0/+577 * Fixup bulk -a errors with BUILD_ALL_PYTHON_FLAVORS=yes.mat2019-01-111-1/+2 * biology/seqtools: fix build on current, if lld is lld7pi2019-01-081-0/+1 * biology/groopm fails to build with python3antoine2019-01-071-1/+1 * Update dns/libidn2 to 2.1.0sunpoet2019-01-072-0/+2 * Update science/hdf5 to 1.10.4sunpoet2019-01-061-1/+1 * biology/ncbi-blast+: Upgrade to 2.8.1jwb2019-01-024-32/+244 * biology/diamond: Update to version 0.9.24jrm2019-01-014-27/+12 * biology/iqtree: switch to outsource cmake buildjrm2018-12-281-2/+2 * Update math/eigen3 to 3.3.7tcberner2018-12-261-0/+1 * Change cmake default behaviour to outsource.tcberner2018-12-268-8/+8 * biology/iqtree: Update to version 1.6.9jrm2018-12-232-5/+4 * - Update to 1.73wen2018-12-222-5/+4 * Remove expired ports:rene2018-12-214-57/+0 * biology/gff2ps: update 0.98d to 0.98legypcio2018-12-202-5/+5 * biology/diamond: Update to 0.9.23 plus fixes after releasejrm2018-12-183-10/+11 * Update Qt5 to 5.12.0tcberner2018-12-161-0/+11 * New port: biology/py-fastTSNE: Fast, parallel implementations of t-SNEyuri2018-12-155-0/+47 * Bump PORTREVISION for ports depending on the canonical version of GCCgerald2018-12-1237-20/+37 * devel/boost-*: update to 1.69.0jbeich2018-12-125-3/+5 * Remove biology/njplotjrm2018-12-115-111/+0 * biology/mummer: Add USES=compiler:c++11-langyuri2018-12-111-1/+1 * biology/mummer: Update 3.23 -> 4.0.0beta2-2yuri2018-12-113-47/+61 * biology/mummer: Take maintainershipyuri2018-12-111-1/+1 * New port: math/checkm: Quality assessment tool for the microbial genomesyuri2018-12-074-0/+43 * New port: math/groopm: Metagenomic binning suiteyuri2018-12-074-0/+35 * devel/gradle: Update to 5.0yuri2018-12-052-4/+4 * biology/gatk: Change gradle4->gradle because it builds fine with both gradle ...yuri2018-12-041-2/+2 * biology/gatk: Correct the targetyuri2018-12-031-1/+1 * New port: biology/gatk: Variant discovery in high-throughput sequencing datayuri2018-12-036-0/+118 * Mark QT4 ports/functionality for removal on 2019-03-15rene2018-12-021-0/+3 * biology/igv: Update 2.4.15 -> 2.4.16yuri2018-11-192-6/+6 * biology/molden: update to 5.8.2jmd2018-11-133-10/+45 * biology/seqan-apps: fix build with GCC-based architecturesswills2018-11-101-2/+4 * biology/molden: Unbreak: fix the problem that it can't find libgcc_s.so from gccyuri2018-11-071-1/+2 * Fix build failure with base GCC because of double typedefs.linimon2018-11-061-0/+48 * Remove the incorrect typedefs to fix build on tier-2.linimon2018-11-062-0/+29 * Remove the inccorrect typedefs to fix build on tier-2.linimon2018-11-061-4/+0 * biology/igv: Update 2.4.10 -> 2.4.15yuri2018-11-053-24/+21 * biology/canu: Upgrade to 1.8, add experimental SLURM integrationjwb2018-11-045-31/+102 * biology/bowtie: Patch for gcc8 and clean upjwb2018-11-042-6/+17 * biology/bowtie: Revert previous commit with missing log messagejwb2018-11-042-17/+5 * biology/bowtie: Patchjwb2018-11-042-5/+17 * biology/py-loompy: Update 2.0.15 -> 2.0.16yuri2018-10-302-4/+4 * biology/iqtree: Update to version 1.6.8jrm2018-10-292-4/+4 * Fix build with tier-2 arches.linimon2018-10-281-1/+7 * biology/py-pyfaidx: Update 0.5.5.1 -> 0.5.5.2yuri2018-10-282-4/+4 * biology/p5-transdecoder: Upgrade to 5.4.0jwb2018-10-234-30/+44 * biology/hyphy: Update to version 2.3.14.16jrm2018-10-203-5/+11 * biology/py-loompy: Update 2.0.14 -> 2.0.15yuri2018-10-192-4/+4 * New port: biology/py-gffutils: Work with GFF and GTF files in a flexible data...yuri2018-10-194-0/+36 * New port: biology/py-pyfaidx: Efficient pythonic random access to fasta subse...yuri2018-10-194-0/+38 * New port: biology/py-gtfparse: Parsing tools for GTF (gene transfer format) f...yuri2018-10-194-0/+32 * biology/ngs-sdk: Update 2.9.2 -> 2.9.3yuri2018-10-193-5/+5 * biology/py-orange3-single-cell: Update 0.8.1 -> 0.8.2yuri2018-10-172-4/+4 * biology/iqtree: Update to version 1.6.7.1jrm2018-10-162-4/+4 * biology/py-orange3-single-cell: Update 0.8.0 -> 0.8.1yuri2018-10-142-6/+11 * biology/py-orange3-bioinformatics: Update 3.2.0 -> 3.2.2yuri2018-10-142-4/+4 * Deprecate most glib12 consumersantoine2018-10-121-0/+3 * Update devel/tbb to version 2019.1 and bump dependent ports' revisionsmartymac2018-10-111-1/+1 * Update to 1.73sunpoet2018-10-102-6/+10 * New port: biology/ncbi-cxx-toolkit: NCBI C++ Toolkityuri2018-10-085-0/+70 * biology/ncbi-toolkit: Update 2012.06.20 -> 2017.01.06yuri2018-10-086-175/+87 * biology/tinker: Update 7.1.3 -> 8.4.4; Move to science/yuri2018-10-0713-1004/+0 * biology/py-biom-format: Update to version 2.1.7jrm2018-10-062-16/+14 * Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, exceptdes2018-10-0615-30/+30 * Update devel/tbb to version 2019 and bump dependent port's revisionsmartymac2018-10-041-0/+1 * - Update to 1-14-10danilo2018-09-294-8/+9 * - Unbreak by adding missing pkg-plistwen2018-09-282-2/+136 * Allow building on powerpc64.linimon2018-09-281-1/+1 * Update Objective-C LLVM version to 6.0.brooks2018-09-261-1/+1 * Change 4 ports from net/mpich2 to net/mpichyuri2018-09-231-3/+5 * - Update to 1.63wen2018-09-222-4/+4 * Fix build on gcc-based archs by updating USES.linimon2018-09-221-1/+1 * Update to 1.5.2sunpoet2018-09-222-6/+7 * New port: biology/py-loompy: Work with .loom files for single-cell RNA-seq datayuri2018-09-214-0/+44 * biology/py-cutadapt: Upgrade to 1.18jwb2018-09-203-50/+9 * biology/ngs-sdk: Update 2.9.1 -> 2.9.2yuri2018-09-203-5/+5 * Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-basedlinimon2018-09-181-1/+1 * More precisely specify USES=compiler to fix build on gcc-basedlinimon2018-09-183-3/+3 * biology/py-pysam: Update 0.15.0 -> 0.15.1yuri2018-09-182-4/+4 * Add DOCS options to ports that should have one.mat2018-09-103-0/+6 * biology/seaview: Fix build with Clang 6tobik2018-09-083-0/+65 * Update science/hdf5 to 1.10.2sunpoet2018-09-061-1/+1 * Update to 1.31.0jhale2018-09-0317-181/+201 * biology/stacks: Enable OpenMP (oversight in previous commit)jwb2018-09-011-2/+2 * biology/iqtree: Update to version 1.6.7jrm2018-08-272-5/+4 * biology/py-bx-python: Update 0.8.1 -> 0.8.2yuri2018-08-262-5/+5 * biology/unanimity: Upgrade to latest release, soften dep version requirementsjwb2018-08-262-11/+10 * biology/protomol: Fix doubled USES overwriting the old valuetobik2018-08-251-3/+2 * biology/protomol: Fix build with Clang 6tobik2018-08-251-0/+1 * biology/primer3: Fix build with Clang 6tobik2018-08-251-0/+24 * biology/libsbml: Fix build with Clang 6tobik2018-08-251-9/+2 * biology/avida: Fix build with Clang 6tobik2018-08-251-0/+1 * biology/lamarc: Fix build with Clang 6tobik2018-08-251-0/+2 * Mark as broken with clang6 after r473289.linimon2018-08-241-1/+9 * - Update to 1.72wen2018-08-242-5/+4 * Remove expired ports:rene2018-08-176-104/+0 * biology/cytoscape: Fix licenseyuri2018-08-122-3/+5 * Mark as broken on arm.linimon2018-08-121-0/+4 * devel/boost-*: update to 1.68.0jbeich2018-08-095-2/+5 * biology/py-orange3-bioinformatics: Update 3.1.1 -> 3.2.0yuri2018-08-092-4/+4 * biology/py-orange3-single-cell: Update 0.7.0 -> 0.8.0yuri2018-08-092-4/+4 * Regular sorting of categories Makefiles.mat2018-08-081-1/+1 * New port: biology/py-orange3-single-cell: Orange add-on for gene expression o...yuri2018-08-074-0/+43 * biology/vcftools: Update to 0.1.16, a security releasejwb2018-08-042-4/+4 * biology/bcftools: update to 1.9fernape2018-08-035-24/+41 * biology/samtools: update to 1.9fernape2018-08-032-8/+7 * biology/htslib: update to 1.9fernape2018-08-032-6/+8 * biology/py-pysam: Update 0.14.1 -> 0.15.0yuri2018-07-313-8/+5 * Bump PORTREVISION for ports depending on the canonical version of GCCgerald2018-07-3015-10/+15 * biology/linux-foldingathome: reset maintainer by requesteadler2018-07-271-1/+1 * biology/seaview: Updatye version 4.6.5=>4.7bofh2018-07-222-4/+4 * biology/molden: Unbreak by updating the MASTER_SITES URLyuri2018-07-201-2/+1 * Mark BROKEN: unfetchaableantoine2018-07-201-0/+1 * biology/htslib: Update 1.6 -> 1.8yuri2018-07-174-10/+8 * Deprecate unmaintained ports under the NONE licenseantoine2018-07-131-0/+3 * biology/molden: Unbreak by updating the MASTER_SITES URLyuri2018-07-131-2/+1 * Mark BROKEN: unfetchableantoine2018-07-131-0/+1 * New port: biology/exonerate: Generic tool for sequence alignmentyuri2018-07-135-0/+67 * biology/py-orange3-bioinformatics: Update 3.1.0 -> 3.1.1yuri2018-07-132-4/+4 * New port: biology/stringtie: Transcript assembly and quantification for RNA-seqyuri2018-07-128-0/+157 * biology/hmmer: update to 3.2.1swills2018-07-114-46/+23 * biology/iqtree: Update to version 1.6.6jrm2018-07-092-4/+4 * New port: biology/cytoscape: Software to visualize molecular interaction netw...yuri2018-07-034-0/+83 * Mark various ports broken on mips64 and, where appropriate, mips.linimon2018-07-021-2/+4 * Mark BROKEN: missing plistantoine2018-06-291-0/+3 * Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mktcberner2018-06-292-4/+4 * New port: biology/igv: Visualization tool for genomic datasetsyuri2018-06-266-0/+77 * Mark as broken on aarch64.linimon2018-06-251-0/+2 * - Update to 5.17.0wen2018-06-253-4/+5 * biology/phyml: update to v3.3.20180621fernape2018-06-232-5/+6 * Update math/gsl to 2.5tcberner2018-06-231-0/+1 * biology/ngs-sdk: Update 2.9.0 -> 2.9.1yuri2018-06-223-5/+5 * Mark these ports as broken on aarch64.linimon2018-06-222-0/+4 * Mark as broken on aarch64, and, where appropriate, armvX.linimon2018-06-224-0/+16 * Use PY_FLAVOR for dependencies.mat2018-06-216-13/+13 * Mark as broken on powerpc64 pending fix for PR 199603.linimon2018-06-191-0/+2 * Adjust USES to fix builds on gcc-based architectures.linimon2018-06-191-1/+1 * Mark ports broken on powerpc64, categories a-c.linimon2018-06-181-3/+4 * biology/bedtools: Fix Makefile to respect PREFIXjwb2018-06-172-0/+22 * New port: biology/py-orange3-bioinformatics: Orange add-on providing common f...yuri2018-06-144-0/+41 * biology/py-Genesis-PyAPI: Remove stray USES=fortranyuri2018-06-131-1/+1 * New port: biology/py-Genesis-PyAPI: API for the Genesis platform for genetics...yuri2018-06-134-0/+29 * biology/artemis: Update 9 -> 17.0.1-11yuri2018-06-124-1719/+72 * New port: biology/ngs-sdk: Tools and libraries for using data in the INSDC Se...yuri2018-06-119-0/+256 * Remove expired ports:rene2018-06-0751-1777/+0 * Update to 2.0.0 and pass maintainership to committer.krion2018-06-068-345/+121 * Add new port: biology/infernalkrion2018-06-066-0/+117 * Mark as broken on powerpc64. The entire, unhelpful, error message is:linimon2018-06-031-0/+2 * Adjust USES to fix building on gcc-based archs (in particular, powerpc64).linimon2018-06-031-1/+1 * Update WWWsunpoet2018-05-2813-13/+13 * biology/hyphy: Update to version 2.3.13jrm2018-05-233-5/+10 * biology/clustal-omega: Multiple alignment of nucleic acid and protein, replac...jwb2018-05-225-0/+64 * biology/clustalx: Multiple alignment of nucleic acid and protein sequences wi...jwb2018-05-225-0/+59 * biology/clustalw: Fix license, take maintainershipjwb2018-05-212-5/+6 * biolog/molden: unbreak after at least two intransparent distfile updatesjmd2018-05-212-6/+4 * biology/fastx-toolkit: Fix build on FreeBSD 12jwb2018-05-162-2/+19 * Add upstream patch to fix the build with Qt 5.10.rakuco2018-05-162-1/+31 * - Update to 3.3.20180214wen2018-05-152-5/+6 * biology/diamond: Update to version 0.9.22jrm2018-05-152-4/+4 * biology/hyphy: Bump PORTREVISION after upstream rerolled releasejrm2018-05-153-14/+4 * biology/py-biopython: Unbreak on python3; Add licenseyuri2018-05-141-2/+9 * biology/iqtree: Update to version 1.6.5jrm2018-05-122-4/+4 * New port, biology/hyphy: Hypothesis testing using Phylogeniesjrm2018-05-117-0/+645 * Mark BROKEN: checksum and size mismatchantoine2018-05-071-0/+2 * Deprecate ports broken for more than 6 monthsantoine2018-05-05