diff options
Diffstat (limited to 'science')
| -rw-r--r-- | science/bft/Makefile | 10 | ||||
| -rw-r--r-- | science/bft/distinfo | 4 | ||||
| -rw-r--r-- | science/bft/files/patch-tests_Makefile.in | 11 | ||||
| -rw-r--r-- | science/bft/pkg-plist | 1 | ||||
| -rw-r--r-- | science/ecs/Makefile | 35 | ||||
| -rw-r--r-- | science/ecs/distinfo | 4 | ||||
| -rw-r--r-- | science/ecs/pkg-plist | 9 | ||||
| -rw-r--r-- | science/fvm/Makefile | 15 | ||||
| -rw-r--r-- | science/fvm/distinfo | 4 | ||||
| -rw-r--r-- | science/fvm/files/patch-tests_Makefile.in | 11 | ||||
| -rw-r--r-- | science/fvm/pkg-plist | 3 | ||||
| -rw-r--r-- | science/ncs/Makefile | 118 | ||||
| -rw-r--r-- | science/ncs/distinfo | 4 | ||||
| -rw-r--r-- | science/ncs/files/patch-bin_Makefile | 10 | ||||
| -rw-r--r-- | science/ncs/files/patch-bin_cs_profile | 34 | ||||
| -rw-r--r-- | science/ncs/files/patch-bin_gracehst | 8 | ||||
| -rw-r--r-- | science/ncs/files/patch-bin_macros_FreeBSD.mk | 153 | ||||
| -rw-r--r-- | science/ncs/files/pkg-message.in | 15 | ||||
| -rw-r--r-- | science/ncs/pkg-plist | 1615 |
19 files changed, 1028 insertions, 1036 deletions
diff --git a/science/bft/Makefile b/science/bft/Makefile index bdd24b49ebab..a1c0d61e8d6b 100644 --- a/science/bft/Makefile +++ b/science/bft/Makefile @@ -6,20 +6,24 @@ # PORTNAME= bft -PORTVERSION= 1.0.8 +PORTVERSION= 1.1.5 CATEGORIES= science parallel -MASTER_SITES= http://research.edf.com/fichiers/fckeditor/Commun/Innovation/logiciels/ +MASTER_SITES= http://research.edf.com/fichiers/fckeditor/Commun/Innovation/logiciels/code_saturne/Releases/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} -EXTRACT_SUFX= .tgz MAINTAINER= thierry@FreeBSD.org COMMENT= Code_Saturne Base Functions and Types library +LICENSE= LGPL21 + WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} +USE_ZIP= yes USE_LDCONFIG= yes GNU_CONFIGURE= yes +MAN1= bft-config.1 + TESTSBIN= bft_test bft_mem_usage_test bft_printf_test pre-configure: diff --git a/science/bft/distinfo b/science/bft/distinfo index fbe737200749..e2042788bb04 100644 --- a/science/bft/distinfo +++ b/science/bft/distinfo @@ -1,2 +1,2 @@ -SHA256 (bft-108.tgz) = 97d1b253312aff787e3415eac08a48f6f79f51f466f6a65edcc6093797ac778c -SIZE (bft-108.tgz) = 443412 +SHA256 (bft-115.zip) = 8af0134375140b7356c9b38ba2475fb57435a8cda5ace319ecc6c903e8d66e79 +SIZE (bft-115.zip) = 431032 diff --git a/science/bft/files/patch-tests_Makefile.in b/science/bft/files/patch-tests_Makefile.in new file mode 100644 index 000000000000..9584eaabb226 --- /dev/null +++ b/science/bft/files/patch-tests_Makefile.in @@ -0,0 +1,11 @@ +--- tests/Makefile.in.orig 2011-07-11 11:05:15.000000000 +0200 ++++ tests/Makefile.in 2012-04-07 15:52:02.000000000 +0200 +@@ -261,7 +261,7 @@ + bft_mem_usage_test_SOURCES = bft_mem_usage_test.c + bft_mem_test_SOURCES = bft_mem_test.c + bft_printf_test_SOURCES = bft_printf_test.c +-all: all-am ++all: $(check_PROGRAMS) + + .SUFFIXES: + .SUFFIXES: .c .lo .o .obj diff --git a/science/bft/pkg-plist b/science/bft/pkg-plist index 08eee58989c4..55124439e51d 100644 --- a/science/bft/pkg-plist +++ b/science/bft/pkg-plist @@ -5,7 +5,6 @@ include/bft_config_priv.h include/bft_error.h include/bft_file.h include/bft_fp_trap.h -include/bft_intl.h include/bft_mem.h include/bft_mem_usage.h include/bft_printf.h diff --git a/science/ecs/Makefile b/science/ecs/Makefile index d1177ffcdfa7..883d4c0e2517 100644 --- a/science/ecs/Makefile +++ b/science/ecs/Makefile @@ -6,32 +6,43 @@ # PORTNAME= ecs -PORTVERSION= 1.3.3 -PORTREVISION= 7 +PORTVERSION= 2.0.2 CATEGORIES= science -MASTER_SITES= http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/ +MASTER_SITES= http://research.edf.com/fichiers/fckeditor/Commun/Innovation/logiciels/code_saturne/Releases/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} -EXTRACT_SUFX= .tgz MAINTAINER= thierry@FreeBSD.org COMMENT= Code_Saturne Preprocessor -LIB_DEPENDS= med.2:${PORTSDIR}/french/med \ +LICENSE= GPLv2 + +LIB_DEPENDS= med.4:${PORTSDIR}/french/med \ bft.1:${PORTSDIR}/science/bft \ hdf5.7:${PORTSDIR}/science/hdf5-18 \ - cgns.0:${PORTSDIR}/science/cgnslib + cgns.3:${PORTSDIR}/science/cgnslib WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} +USE_ZIP= yes GNU_CONFIGURE= yes CONFIGURE_ARGS= --with-bft=${LOCALBASE} \ --with-hdf5=${LOCALBASE} \ --with-cgns=${LOCALBASE} \ --with-med=${LOCALBASE} \ - --with-metis=${LOCALBASE} + --with-metis=${LOCALBASE} \ + --with-metis-include=${LOCALBASE}/include/metis CONFIGURE_ENV= PTHREAD_LIBS=${PTHREAD_LIBS} USE_GMAKE= yes +.if defined(WITH_CCMIO) +LIB_DEPENDS+= adf.5:${PORTSDIR}/science/libccmio \ + ccmio.2:${PORTSDIR}/science/libccmio +CONFIGURE_ARGS+=--with-adf=${LOCALBASE} \ + --with-ccm=${LOCALBASE} +.else +CONFIGURE_ARGS+=--without-adf --without-ccm +.endif + .if defined(WITHOUT_NLS) CONFIGURE_ARGS+= --disable-nls PLIST_SUB+= NLS="@comment " @@ -45,13 +56,14 @@ PLIST_SUB+= NLS="" CONFIGURE_ARGS+= --enable-debug .endif -#NOPORTDOCS= yes # PDF not produced ATM .if !defined(NOPORTDOCS) BUILD_DEPENDS+= pdflatex:${PORTSDIR}/print/teTeX-base \ fig2dev:${PORTSDIR}/print/transfig -PORTDOCS= mi_ecs.pdf mu_ecs.pdf +PORTDOCS= mi_ecs.pdf mt_ecs.pdf .endif +MAN1= cs_io_dump.1 cs_partition.1 cs_preprocess-config.1 cs_preprocess.1 + .include <bsd.port.pre.mk> .if exists(${LOCALBASE}/bin/partdmesh) @@ -62,6 +74,11 @@ LIB_DEPENDS+= metis.1:${PORTSDIR}/math/metis BUILD_DEPENDS+= ${LOCALBASE}/lib/libmetis.a:${PORTSDIR}/math/metis-edf .endif +.if ${ARCH} == "i386" +BUILD_DEPENDS+= ${LOCALBASE}/lib/libscotch.a:${PORTSDIR}/cad/scotch +CONFIGURE_ARGS+= --with-scotch=${LOCALBASE} +.endif + pre-configure: .if !defined(NOPORTDOCS) ${REINPLACE_CMD} -e '/^SUBDIRS/s| po| po doc|' ${WRKSRC}/Makefile.in diff --git a/science/ecs/distinfo b/science/ecs/distinfo index f053dd6e145c..0e6be81e8978 100644 --- a/science/ecs/distinfo +++ b/science/ecs/distinfo @@ -1,2 +1,2 @@ -SHA256 (ecs-133.tgz) = 60c3519cc7b9fdd80f41844e3c5a04be88459493e6abd82ed960304822d1bf13 -SIZE (ecs-133.tgz) = 1263592 +SHA256 (ecs-202.zip) = 237712e1df2bb1a7a479407ebf325c5ebb89ccaf29d86e9f52f52907677f23a2 +SIZE (ecs-202.zip) = 1369458 diff --git a/science/ecs/pkg-plist b/science/ecs/pkg-plist index ff4ad28c07d6..d65322b5e807 100644 --- a/science/ecs/pkg-plist +++ b/science/ecs/pkg-plist @@ -1,4 +1,5 @@ -bin/ecs -bin/ecs-config -bin/perm_nopo -%%NLS%%share/locale/fr/LC_MESSAGES/ecs.mo +bin/cs_preprocess-config +bin/cs_preprocess +bin/cs_partition +bin/cs_io_dump +%%NLS%%share/locale/fr/LC_MESSAGES/cs_preprocess.mo diff --git a/science/fvm/Makefile b/science/fvm/Makefile index a4467f21515e..09a4690eb1f2 100644 --- a/science/fvm/Makefile +++ b/science/fvm/Makefile @@ -6,23 +6,24 @@ # PORTNAME= fvm -PORTVERSION= 0.12.0 -PORTREVISION= 5 +PORTVERSION= 0.15.3 CATEGORIES= science parallel -MASTER_SITES= http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/ +MASTER_SITES= http://research.edf.com/fichiers/fckeditor/Commun/Innovation/logiciels/code_saturne/Releases/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} -EXTRACT_SUFX= .tgz MAINTAINER= thierry@FreeBSD.org COMMENT= Code_Saturne Finite Volume Mesh -LIB_DEPENDS= med.2:${PORTSDIR}/french/med \ +LICENSE= LGPL21 + +LIB_DEPENDS= med.4:${PORTSDIR}/french/med \ bft.1:${PORTSDIR}/science/bft \ hdf5.7:${PORTSDIR}/science/hdf5-18 \ - cgns.0:${PORTSDIR}/science/cgnslib + cgns.3:${PORTSDIR}/science/cgnslib WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} +USE_ZIP= yes USE_LDCONFIG= yes GNU_CONFIGURE= yes CONFIGURE_ARGS= --with-bft=${LOCALBASE} \ @@ -49,6 +50,8 @@ CONFIGURE_ARGS+= --with-mpi=${LOCALBASE} CONFIGURE_ARGS+= --enable-debug .endif +MAN1= fvm-config.1 + TESTSBIN= fvm_file_test fvm_interface_test fvm_selector_postfix_test fvm_selector_test pre-configure: diff --git a/science/fvm/distinfo b/science/fvm/distinfo index b030387370dc..cd7561038680 100644 --- a/science/fvm/distinfo +++ b/science/fvm/distinfo @@ -1,2 +1,2 @@ -SHA256 (fvm-0120.tgz) = 92bd5210ce59684d71d75ae0a4f08fae947a03195f9dfe2617ed97535ccbdd2f -SIZE (fvm-0120.tgz) = 721797 +SHA256 (fvm-0153.zip) = 7d367301126284f58556960811ed7c1c59e62ac7a1cfcd29e6551a560c3f4585 +SIZE (fvm-0153.zip) = 832286 diff --git a/science/fvm/files/patch-tests_Makefile.in b/science/fvm/files/patch-tests_Makefile.in new file mode 100644 index 000000000000..00360f3a5962 --- /dev/null +++ b/science/fvm/files/patch-tests_Makefile.in @@ -0,0 +1,11 @@ +--- tests/Makefile.in.orig 2011-07-11 11:17:01.000000000 +0200 ++++ tests/Makefile.in 2012-04-07 16:46:12.000000000 +0200 +@@ -300,7 +300,7 @@ + @HAVE_MPI_TRUE@fvm_coupling_test_LDADD = $(top_builddir)/src/libfvm_coupl.la \ + @HAVE_MPI_TRUE@ @BFT_LIBS@ @MPI_LIBS@ + +-all: all-am ++all: $(check_PROGRAMS) + + .SUFFIXES: + .SUFFIXES: .c .lo .o .obj diff --git a/science/fvm/pkg-plist b/science/fvm/pkg-plist index 9c61ab23d00c..ab1e7839fb9e 100644 --- a/science/fvm/pkg-plist +++ b/science/fvm/pkg-plist @@ -9,6 +9,7 @@ include/fvm_group.h include/fvm_interface.h include/fvm_io_num.h include/fvm_locator.h +include/fvm_neighborhood.h include/fvm_nodal.h include/fvm_nodal_append.h include/fvm_nodal_extract.h @@ -21,7 +22,9 @@ include/fvm_order.h include/fvm_parall.h include/fvm_part_to_block.h include/fvm_periodicity.h +include/fvm_point_location.h include/fvm_selector.h +include/fvm_trace.h include/fvm_triangulate.h include/fvm_writer.h lib/libfvm.a diff --git a/science/ncs/Makefile b/science/ncs/Makefile index 70eae35c66e7..f32112ab9516 100644 --- a/science/ncs/Makefile +++ b/science/ncs/Makefile @@ -6,28 +6,41 @@ # PORTNAME= ncs -PORTVERSION= 1.3.3 -PORTREVISION= 9 +PORTVERSION= 2.0.4 CATEGORIES= science parallel -MASTER_SITES= http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/ +MASTER_SITES= http://research.edf.com/fichiers/fckeditor/Commun/Innovation/logiciels/code_saturne/Releases/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} -EXTRACT_SUFX= .tgz MAINTAINER= thierry@FreeBSD.org COMMENT= Code_Saturne Kernel -LIB_DEPENDS= fvm.0:${PORTSDIR}/science/fvm +LICENSE= GPLv2 + +BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}qt4-core>=0:${PORTSDIR}/devel/py-qt4 \ + cs_preprocess:${PORTSDIR}/science/ecs \ + pyrcc4:${PORTSDIR}/textproc/py-qt4-xml +LIB_DEPENDS= fvm.0:${PORTSDIR}/science/fvm \ + mei.0:${PORTSDIR}/science/mei RUN_DEPENDS= xmgrace:${PORTSDIR}/math/grace \ - ecs:${PORTSDIR}/science/ecs + bash:${PORTSDIR}/shells/bash \ + xterm:${PORTSDIR}/x11/xterm \ + cs_preprocess:${PORTSDIR}/science/ecs +USE_ZIP= yes USE_GMAKE= yes +USE_ICONV= yes +USE_GETTEXT= yes USE_GNOME= libxml2 USE_PYTHON= yes +USE_QT_VER= 4 WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} -BUILD_WRKSRC= ${WRKSRC}/bin -MAKE_ENV= NOM_ARCH=${OPSYS} CS_HOME=${WRKSRC} CS_MPI_PATH=${MPI_HOME}/bin \ - PTHREAD_LIBS=${PTHREAD_LIBS} TERM=${TERM} \ +CPPFLAGS+= -I${LOCALBASE}/include/libxml2 +GNU_CONFIGURE= yes +CONFIGURE_ENV= MPI_LIBS="${MPI_LIBS}" +MAKE_ENV= NOM_ARCH=${OPSYS} CS_MPI_PATH=${MPI_HOME}/bin \ + PTHREAD_LIBS=${PTHREAD_LIBS} TERM=${TERM} \ MPI_HOME=${MPI_HOME} MPI_LIBS="${MPI_LIBS}" +USE_LDCONFIG= yes USE_FORTRAN= yes FORTRANLIBDIR= `${DIRNAME} \\`${FC} -print-libgcc-file-name\\`` @@ -39,20 +52,14 @@ TERM= vt100 # Force for pointyhat to override su TERM?= vt100 # Default value needed for tput in jail or tinderbox .endif -PATHCS= ${PREFIX}/Saturne -CS_HOME= ${PATHCS}/Noyau/ncs -ECS_HOME= ${PATHCS}/Enveloppe/ecs -PLIST_SUB= CS_HOME=Saturne/Noyau/ncs ECS_HOME=Saturne/Enveloppe/ecs - -SUB_FILES= pkg-message -PKGMESSAGE= ${WRKDIR}/pkg-message - SUB_DIRS= data include src users BIN_SCRIPTS= autovalid check_mesh compiler_version cree_sat cs.exe gracehst \ grp info_cs lance_install rang_mpi.sh BIN_DATAS= Makefile SaturneGUI autovalid.xml cs_profile lance lance.help \ macros_FreeBSD.mk +MAN1= code_saturne.1 cs_solver.1 + .if defined(WITH_LAM) MPI_HOME= ${LOCALBASE} BUILD_DEPENDS+= ${MPI_HOME}/lib/liblam.a:${PORTSDIR}/net/lam @@ -73,7 +80,9 @@ MPI_LIBS= -lmpich -lmpl ${PTHREAD_LIBS} .if !defined(NOPORTDOCS) BUILD_DEPENDS+= pdftex:${PORTSDIR}/print/teTeX-base \ fig2dev:${PORTSDIR}/print/transfig -DOCS= AUTHORS COMPATIBILITY Changelog TODO +ALL_TARGET= all pdf +INSTALL_TARGET= install install-pdf +DOCS= AUTHORS COMPATIBILITY ChangeLog README .endif .include <bsd.port.pre.mk> @@ -104,75 +113,16 @@ pre-everything:: @${ECHO_MSG} "WITHOUT_BLAS or WITHOUT_ATLAS if you prefer." @${ECHO_MSG} -pre-patch: - ${CP} -p ${WRKSRC}/bin/macros_Linux.mk ${WRKSRC}/bin/macros_FreeBSD.mk - -do-configure: - ${REINPLACE_CMD} -e 's|%%LOCALBASE%%|${LOCALBASE}|' \ - -e 's|%%FC%%|${FC}|' \ - -e 's|%%PTHREAD_LIBS%%|${PTHREAD_LIBS}|' \ - -e 's|%%MPI_HOME%%|${MPI_HOME}|' \ - -e 's|%%MPI_LIBS%%|${MPI_LIBS}|' \ - ${BUILD_WRKSRC}/cs_profile -.if defined(WITH_ATLAS) - ${REINPLACE_CMD} -e 's|BLAS =0|BLAS =1|' \ - ${BUILD_WRKSRC}/macros_FreeBSD.mk -.endif -.if !defined(WITHOUT_BLAS) && !defined(WITHOUT_ATLAS) - ${REINPLACE_CMD} -e 's|BLAS_LDFLAGS =|BLAS_LDFLAGS =${BLAS_LIB}|' \ - -e 's|BLAS_INC =|BLAS_INC =-I${LOCALBASE}/include|' \ - ${BUILD_WRKSRC}/macros_FreeBSD.mk -.endif - ${REINPLACE_CMD} -e 's|make|${GMAKE}|g' ${BUILD_WRKSRC}/lance_install +pre-configure: + ${REINPLACE_CMD} -e 's|/bin/bash| ${LOCALBASE}/bin/bash|' ${WRKSRC}/bin/runcase.in -do-build: - (cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} ./lance_install) - @${ECHO_MSG} - @${ECHO_MSG} "===> Build terminated." - @${ECHO_MSG} - (cd ${WRKSRC}/arch/${OPSYS}; ${FIND} . -name ".readme*" | ${XARGS} \ - ${GREP} -B 10 '^Stop in ') || ${TRUE} +post-install: .if !defined(NOPORTDOCS) - @${ECHO_MSG} - @${ECHO_MSG} "===> Building documentation." - @${ECHO_MSG} - (cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} ./lance_install DOC) + ${INSTALL_DATA} ${DOCS:C|^|${WRKSRC}/|} ${DOCSDIR} .endif - -do-install: - ${FIND} ${WRKSRC}/arch/${OPSYS}/lib -name "libsaturne*" -exec \ - ${INSTALL_DATA} {} ${PREFIX}/lib \; - ${MKDIR} ${CS_HOME}/bin ${CS_HOME}/arch/${OPSYS}/bin \ - ${CS_HOME}/arch/${OPSYS}/lib ${ECS_HOME}/bin - ${LN} -sf ${PREFIX}/lib/libsaturne*.a ${CS_HOME}/arch/${OPSYS}/lib/ -.for sd in ${SUB_DIRS} - (cd ${WRKSRC}/ && ${COPYTREE_SHARE} ${sd} ${CS_HOME}) -.endfor - ${CHMOD} -R u+w ${CS_HOME}/users - (cd ${BUILD_WRKSRC}/ && ${COPYTREE_SHARE} Autovalidation ${CS_HOME}/bin/) - ${INSTALL_SCRIPT} ${BIN_SCRIPTS:S|^|${BUILD_WRKSRC}/|} ${CS_HOME}/bin/ - ${INSTALL_DATA} ${BIN_DATAS:S|^|${BUILD_WRKSRC}/|} ${CS_HOME}/bin/ - ${CHMOD} u+w ${CS_HOME}/bin/lance - ${LN} -sf ${LOCALBASE}/bin/ecs ${ECS_HOME}/bin/ - @${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${CS_HOME}/bin/Autovalidation - @${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${CS_HOME}/bin/Autovalidation - ${INSTALL_PROGRAM} ${WRKSRC}/arch/${OPSYS}/bin/cs13.exe \ - ${CS_HOME}/arch/${OPSYS}/bin -.if !defined(NOPORTDOCS) - ${MKDIR} ${DOCSDIR} ${CS_HOME}/doc/THEORY/ ${CS_HOME}/doc/USER/ \ - ${CS_HOME}/doc/TUTORIAL/ - ${INSTALL_DATA} ${WRKSRC}/doc/THEORY/theory.pdf ${CS_HOME}/doc/THEORY/ - ${INSTALL_DATA} ${WRKSRC}/doc/TUTORIAL/tutorial.pdf ${CS_HOME}/doc/TUTORIAL/ - ${INSTALL_DATA} ${WRKSRC}/doc/USER/user.pdf ${CS_HOME}/doc/USER/ - ${LN} -sf ${CS_HOME}/doc/THEORY/theory.pdf ${CS_HOME}/doc/TUTORIAL/tutorial.pdf \ - ${CS_HOME}/doc/USER/user.pdf ${DOCSDIR}/ - ${INSTALL_DATA} ${DOCS:S|^|${WRKSRC}/|} ${DOCSDIR} - ${LN} -sf ${LOCALBASE}/share/doc/ecs/ ${ECS_HOME}/doc +.if !defined(NOPORTEXAMPLES) + ${MKDIR} ${EXAMPLESDIR} + cd ${WRKSRC}/examples && ${COPYTREE_SHARE} \* ${EXAMPLESDIR} .endif -post-install: - @${ECHO_MSG} - @${CAT} ${PKGMESSAGE} - @${ECHO_MSG} - .include <bsd.port.post.mk> diff --git a/science/ncs/distinfo b/science/ncs/distinfo index 61daaf82ae9c..97f03442656f 100644 --- a/science/ncs/distinfo +++ b/science/ncs/distinfo @@ -1,2 +1,2 @@ -SHA256 (ncs-133.tgz) = 7cec5ab535aca3eed8b8bb5e410a3f01db3ce40cfd3090a6727f7c048f8ee41f -SIZE (ncs-133.tgz) = 12138504 +SHA256 (ncs-204.zip) = 2c46b5b08b6335a666fa4ab953e3026a71c8bcff4fb46322718e8d10a310d410 +SIZE (ncs-204.zip) = 11921542 diff --git a/science/ncs/files/patch-bin_Makefile b/science/ncs/files/patch-bin_Makefile deleted file mode 100644 index b97e80d45ccf..000000000000 --- a/science/ncs/files/patch-bin_Makefile +++ /dev/null @@ -1,10 +0,0 @@ ---- bin/Makefile.orig 2008-02-18 19:51:37.000000000 +0100 -+++ bin/Makefile 2008-04-29 23:19:31.000000000 +0200 -@@ -174,7 +174,6 @@ - - link: - @make privtitre -- @make privconfig - @make privcompil - @make privlink - @make privfin diff --git a/science/ncs/files/patch-bin_cs_profile b/science/ncs/files/patch-bin_cs_profile deleted file mode 100644 index f23229a90dd9..000000000000 --- a/science/ncs/files/patch-bin_cs_profile +++ /dev/null @@ -1,34 +0,0 @@ ---- bin/cs_profile.orig 2008-11-13 19:49:48.000000000 +0100 -+++ bin/cs_profile 2009-01-25 10:23:09.000000000 +0100 -@@ -62,12 +62,16 @@ - elif [ "$NOM_ARCH" = "Blue_Gene_P" ] ; then - CS_ROOT=/gpfs/home/saturne - else -- CS_ROOT=/home/saturne -+ CS_ROOT=%%LOCALBASE%%/Saturne - fi -- CS_HOME=${CS_ROOT}/Noyau/ncs-1.3.3 -- ECS_HOME=${CS_ROOT}/Enveloppe/ecs-1.3.3 -- CSGUI_HOME=${CS_ROOT}/Interface/ics-1.3.3 -- SYRCS_HOME=${CS_ROOT}/opt/syr_cs-2.1.1 -+ CS_HOME=${CS_ROOT}/Noyau/ncs -+ ECS_HOME=${CS_ROOT}/Enveloppe/ecs -+ CSGUI_HOME=${CS_ROOT}/Interface/ics -+ SYRCS_HOME=${CS_ROOT}/opt/syr_cs -+# Variables specifiques a passer au Makefile FreeBSD par lance -+ LOCALBASE=%%LOCALBASE%% ; export LOCALBASE -+ FC=%%FC%% ; export FC -+ PTHREAD_LIBS=%%PTHREAD_LIBS%% ; export PTHREAD_LIBS - # - if [ "$NOM_ARCH" = "Linux" -a -d /home/prevalcs/HOMARD ] ; then - CSHOMARD_HOME=/home/prevalcs/HOMARD -@@ -94,6 +98,8 @@ - elif [ "$NOM_ARCH" = "Linux_Ch" ] ; then - CS_MPI_PATH=/usr/local/mpichgm-1.2.6.14b-64b/bin - else -- CS_MPI_PATH= -+ MPI_HOME=%%MPI_HOME%% ; export MPI_HOME -+ MPI_LIBS=%%MPI_LIBS%% ; export MPI_LIBS -+ CS_MPI_PATH=${MPI_HOME}/bin - fi - export CS_MPI_PATH diff --git a/science/ncs/files/patch-bin_gracehst b/science/ncs/files/patch-bin_gracehst deleted file mode 100644 index 8f2e164ee331..000000000000 --- a/science/ncs/files/patch-bin_gracehst +++ /dev/null @@ -1,8 +0,0 @@ ---- bin/gracehst.orig 2007-11-23 18:35:59.000000000 +0100 -+++ bin/gracehst 2007-12-30 22:02:36.000000000 +0100 -@@ -1,4 +1,4 @@ --#!/bin/ksh -+#! /bin/sh - #============================================================================ - # - # Code_Saturne version 1.3 diff --git a/science/ncs/files/patch-bin_macros_FreeBSD.mk b/science/ncs/files/patch-bin_macros_FreeBSD.mk deleted file mode 100644 index bd732de1f11a..000000000000 --- a/science/ncs/files/patch-bin_macros_FreeBSD.mk +++ /dev/null @@ -1,153 +0,0 @@ ---- bin/macros_FreeBSD.mk.orig 2008-11-05 18:48:56.000000000 +0100 -+++ bin/macros_FreeBSD.mk 2009-01-25 10:37:09.000000000 +0100 -@@ -1,3 +1,4 @@ -+# $FreeBSD$ - #============================================================================ - # - # Code_Saturne version 1.3 -@@ -29,13 +30,13 @@ - # - #============================================================================ - # --# Macros for Makefile under Linux x86 --##################################### -+# Macros for Makefile under FreeBSD -+################################### - # - # Macros for BFT - #--------------- - --BFT_HOME =/home/saturne/opt/bft-1.0.8/arch/Linux -+BFT_HOME =${LOCALBASE} - - BFT_INC =-I$(BFT_HOME)/include - BFT_LDFLAGS =-L$(BFT_HOME)/lib -lbft -@@ -43,7 +44,7 @@ - # Macros for FVM - #--------------- - --FVM_HOME =/home/saturne/opt/fvm-0.12.0/arch/Linux -+FVM_HOME =${LOCALBASE} - - FVM_INC =-I$(FVM_HOME)/include - FVM_LDFLAGS =-L$(FVM_HOME)/lib -lfvm -@@ -56,10 +57,9 @@ - MPE =0 - MPE_COMM =0 - --# For Open MPI on saturne --MPI_HOME =/home/saturne/opt/openmpi-1.2.6/arch/Linux -+# For MPI on saturne - MPI_INC =-I$(MPI_HOME)/include --MPI_LIB =-pthread -L$(MPI_HOME)/lib -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl -+MPI_LIB =-L$(MPI_HOME)/lib ${MPI_LIBS} $(PTHREAD_LIBS) - - # Macros for Sockets - #------------------- -@@ -75,20 +75,19 @@ - # XML support - XML =1 - --XML_HOME = -+XML_HOME = ${LOCALBASE} - --XML_INC =-I/usr/include/libxml2 --XML_LIB =-lxml2 -+XML_INC =-I$(XML_HOME)/include/libxml2 -+XML_LIB =-L$(XML_HOME)/lib -lxml2 - - # Macros for BLAS - #---------------- - - # BLAS support --BLAS =1 --BLAS_HOME = --BLAS_INC =-I/usr/include -+BLAS =0 -+BLAS_INC = - BLAS_CFLAGS =-D_CS_HAVE_CBLAS --BLAS_LDFLAGS =-lcblas -latlas -+BLAS_LDFLAGS = - - # Macros for gettext - #------------------- -@@ -110,19 +109,19 @@ - # C compiler - #----------- - --CCOMP = /home/saturne/opt/gcc-4.3.1/arch/Linux/bin/gcc -+CCOMP = $(CC) - - CCOMPFLAGSDEF = -std=c99 -funsigned-char -pedantic -W -Wall -Wshadow \ - -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings \ - -Wstrict-prototypes -Wmissing-prototypes \ - -Wmissing-declarations -Wnested-externs -Wno-uninitialized - --CCOMPFLAGS = $(CCOMPFLAGSDEF) -O -Wno-unused --CCOMPFLAGSOPTPART1 = $(CCOMPFLAGSDEF) -O2 --CCOMPFLAGSOPTPART2 = $(CCOMPFLAGSDEF) -O2 --CCOMPFLAGSOPTPART3 = $(CCOMPFLAGSDEF) -O0 -+CCOMPFLAGS = $(CCOMPFLAGSDEF) $(CFLAGS) -Wno-unused -+CCOMPFLAGSOPTPART1 = $(CCOMPFLAGSDEF) $(CFLAGS) -+CCOMPFLAGSOPTPART2 = $(CCOMPFLAGSDEF) $(CFLAGS) -+CCOMPFLAGSOPTPART3 = $(CCOMPFLAGSDEF) $(CFLAGS) - CCOMPFLAGSLO = $(CCOMPFLAGSDEF) -O0 --CCOMPFLAGSDBG = $(CCOMPFLAGSDEF) -g3 -+CCOMPFLAGSDBG = $(CCOMPFLAGSDEF) -g - CCOMPFLAGSPROF = -pg - CCOMPFLAGSVERS = -v - -@@ -131,14 +130,14 @@ - #----------------- - # Profiling gprof : -pg -a - --FTNCOMP = /home/saturne/opt/gcc-4.3.1/arch/Linux/bin/gfortran -+FTNCOMP = $(FC) - - FTNCOMPFLAGSDEF = -I. - --FTNCOMPFLAGS = $(FTNCOMPFLAGSDEF) -O1 --FTNCOMPFLAGSOPTPART1 = $(FTNCOMPFLAGSDEF) -O2 --FTNCOMPFLAGSOPTPART2 = $(FTNCOMPFLAGSDEF) -O3 --FTNCOMPFLAGSOPTPART3 = $(FTNCOMPFLAGSDEF) -O0 -+FTNCOMPFLAGS = $(FTNCOMPFLAGSDEF) $(FFLAGS) -+FTNCOMPFLAGSOPTPART1 = $(FTNCOMPFLAGSDEF) $(FFLAGS) -+FTNCOMPFLAGSOPTPART2 = $(FTNCOMPFLAGSDEF) $(FFLAGS) -+FTNCOMPFLAGSOPTPART3 = $(FTNCOMPFLAGSDEF) $(FFLAGS) - FTNCOMPFLAGSLO = $(FTNCOMPFLAGSDEF) -O0 - FTNCOMPFLAGSDBG = $(FTNCOMPFLAGSDEF) -g - FTNCOMPFLAGSPROF = -pg -@@ -152,12 +151,12 @@ - # Linker - - LDEDL = $(FTNCOMP) --LDEDLFLAGS = -O --LDEDLFLAGSLO = -O0 -+LDEDLFLAGS = $(LDFLAGS) -+LDEDLFLAGSLO = $(LDFLAGS) - LDEDLFLAGSDBG = -g - LDEDLFLAGSPROF = -pg - LDEDLFLAGSVERS = -v --LDEDLRPATH = -rdynamic -Wl,-rpath -Wl,/home/saturne/opt/gcc-4.3.1/arch/Linux/lib: -+LDEDLRPATH = -rdynamic -Wl,-rpath -Wl,${LOCALBASE}/lib: - - - # Set preprocessor variables -@@ -172,7 +171,7 @@ - - # Base libraries (always used) - --LIBBASIC = $(BFT_LDFLAGS) $(FVM_LDFLAGS) -lm -lpthread -+LIBBASIC = $(BFT_LDFLAGS) $(FVM_LDFLAGS) -lm $(PTHREAD_LIBS) - - # Libraries in production mode - -@@ -188,7 +187,7 @@ - - # Library in ElectricFence (malloc debugger) mode - --LIBEF =-L/home/saturne/opt/efence-2.1.14/arch/Linux/lib -lefence -+LIBEF =-L${LOCALBASE}/lib -lefence - - # Optional lists of files to compile with specific options - #--------------------------------------------------------- diff --git a/science/ncs/files/pkg-message.in b/science/ncs/files/pkg-message.in deleted file mode 100644 index 5de7a18d8b27..000000000000 --- a/science/ncs/files/pkg-message.in +++ /dev/null @@ -1,15 +0,0 @@ -=============================================================================== -The current version of Code_Saturne is located in the directory -%%PREFIX%%/Saturne/Noyau/ncs - -In order to use Code Saturne, every user must add the following line in their -file ".profile": - -. %%PREFIX%%/Saturne/Noyau/ncs/bin/cs_profile - -For more information refer to the Code_Saturne documentation, available through -the "info_cs" command. - -The Graphical User Interface must be installed separately; it is available as -a FreeBSD port: science/ics. -=============================================================================== diff --git a/science/ncs/pkg-plist b/science/ncs/pkg-plist index d0fc0c9ea571..24b9b5027daa 100644 --- a/science/ncs/pkg-plist +++ b/science/ncs/pkg-plist @@ -1,707 +1,920 @@ -%%ECS_HOME%%/bin/ecs -%%PORTDOCS%%%%ECS_HOME%%/doc -%%CS_HOME%%/arch/FreeBSD/bin/cs13.exe -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneBASE.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneCFBL.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneCOGZ.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneCPLV.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneELEC.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneFUEL.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneLAGR.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneMATI.a -%%CS_HOME%%/arch/FreeBSD/lib/libsaturneRAYT.a -%%CS_HOME%%/bin/Autovalidation/Case.py -%%CS_HOME%%/bin/Autovalidation/Case.pyc -%%CS_HOME%%/bin/Autovalidation/Case.pyo -%%CS_HOME%%/bin/Autovalidation/Chrono.py -%%CS_HOME%%/bin/Autovalidation/Chrono.pyc -%%CS_HOME%%/bin/Autovalidation/Chrono.pyo -%%CS_HOME%%/bin/Autovalidation/CommandLine.py -%%CS_HOME%%/bin/Autovalidation/CommandLine.pyc -%%CS_HOME%%/bin/Autovalidation/CommandLine.pyo -%%CS_HOME%%/bin/Autovalidation/Common.py -%%CS_HOME%%/bin/Autovalidation/Common.pyc -%%CS_HOME%%/bin/Autovalidation/Common.pyo -%%CS_HOME%%/bin/Autovalidation/Listing.py -%%CS_HOME%%/bin/Autovalidation/Listing.pyc -%%CS_HOME%%/bin/Autovalidation/Listing.pyo -%%CS_HOME%%/bin/Autovalidation/Parser.py -%%CS_HOME%%/bin/Autovalidation/Parser.pyc -%%CS_HOME%%/bin/Autovalidation/Parser.pyo -%%CS_HOME%%/bin/Autovalidation/Study.py -%%CS_HOME%%/bin/Autovalidation/Study.pyc -%%CS_HOME%%/bin/Autovalidation/Study.pyo -%%CS_HOME%%/bin/Autovalidation/__init__.py -%%CS_HOME%%/bin/Autovalidation/__init__.pyc -%%CS_HOME%%/bin/Autovalidation/__init__.pyo -%%CS_HOME%%/bin/Makefile -%%CS_HOME%%/bin/SaturneGUI -%%CS_HOME%%/bin/autovalid -%%CS_HOME%%/bin/autovalid.xml -%%CS_HOME%%/bin/check_mesh -%%CS_HOME%%/bin/compiler_version -%%CS_HOME%%/bin/cree_sat -%%CS_HOME%%/bin/cs.exe -%%CS_HOME%%/bin/cs_profile -%%CS_HOME%%/bin/gracehst -%%CS_HOME%%/bin/grp -%%CS_HOME%%/bin/info_cs -%%CS_HOME%%/bin/lance -%%CS_HOME%%/bin/lance.help -%%CS_HOME%%/bin/lance_install -%%CS_HOME%%/bin/macros_FreeBSD.mk -%%CS_HOME%%/bin/rang_mpi.sh -%%CS_HOME%%/data/mati/emm.dat -%%CS_HOME%%/data/mati/emm.geom -%%CS_HOME%%/data/mati/vault.dat -%%CS_HOME%%/data/mati/vault.geom 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