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* science/ncnn: Update 20190611-40-gd3be711 -> 20190611-113-g46e7ac7yuri2019-09-023-27/+22
* Bump PORTREVISION for science/netcdf-fortran shlib changesunpoet2019-09-013-3/+3
* Update to 4.5.0sunpoet2019-09-013-16/+12
* Remove CONFLICTS: it is over 5 years agosunpoet2019-09-011-5/+2
* Update to 4.7.1sunpoet2019-09-013-6/+7
* Update to 2.13.1sunpoet2019-09-013-4/+13
* science/py-spglib: Update 1.13.0 -> 1.14.1yuri2019-08-312-5/+7
* science/kim-api: Update 2.1.2 -> 2.1.3yuri2019-08-312-4/+4
* Remove DAP optionsunpoet2019-08-311-7/+6
* Mark CONFLICTS_INSTALL between science/eccodes and science/grib_apisunpoet2019-08-312-0/+4
* Sort SUBDIRssunpoet2019-08-311-1/+1
* science/py-qcengine: Update 0.8.2 -> 0.10.0yuri2019-08-312-5/+5
* science/py-qcelemental: Update 0.6.1 -> 0.7.0yuri2019-08-312-4/+4
* science/py-phonopy: Update 2.2.0 -> 2.3.0yuri2019-08-312-4/+4
* Update version requirement of RUN_DEPENDSsunpoet2019-08-291-1/+1
* Update to 2.1.1sunpoet2019-08-292-4/+4
* - Switch to new test framework (note that test currently segfaults)amdmi32019-08-282-5/+2
* Move science/py-onnx -> math/py-onnxyuri2019-08-275-76/+0
* Update to 0.114sunpoet2019-08-262-6/+6
* Temporarily mark this as broken on powerpc64 until I can investigatelinimon2019-08-262-0/+14
* science/jmol: Update 14.29.51 -> 14.29.52yuri2019-08-262-4/+4
* science/py-chainer: Update 6.2.0 -> 6.3.0yuri2019-08-262-4/+4
* - Update to 3.1.3wen2019-08-252-5/+4
* science/opensim-core: Add the JAVA option that adds the Java bindingyuri2019-08-252-2/+721
* science/opensim-core: Update 4.0 -> 4.0-601 (a2574fcda)yuri2019-08-253-6/+64
* - Add LICENSE_FILEamdmi32019-08-222-9/+8
* science/nwchem: Update 6.8.1.20190816 (b8ef5a23b) -> 6.8.1.20190820 (2450e37ef)yuri2019-08-212-5/+5
* science/py-gsd: Update 1.7.0 -> 1.8.1yuri2019-08-202-4/+4
* science/py-qcelemental: Update 0.5.0 -> 0.6.1yuri2019-08-202-5/+5
* science/rdkit: fix build on GCC architecturespkubaj2019-08-202-13/+22
* devel/boost-*: update to 1.71.0jbeich2019-08-1919-16/+19
* science/py-OpenFermion: Update 0.9.0 -> 0.10.0yuri2019-08-192-7/+8
* science/jmol: Update 14.29.50 -> 14.29.51yuri2019-08-192-4/+4
* science/wwplot: Update 0.0.6 -> 0.0.7yuri2019-08-192-4/+4
* science/nwchem: 6.8.1.20190809 (81507e607) -> 6.8.1.20190816 (b8ef5a23b)yuri2019-08-172-5/+5
* science/erkale: Fix RUN_DEPENDSyuri2019-08-171-1/+1
* science/py-ruffus: Update to 2.8.3kai2019-08-162-4/+4
* - Add new fpc bootstrap (i386 and x86_64). It could need less COMPATXacm2019-08-162-2/+2
* science/vmd: Add USES=glyuri2019-08-161-5/+3
* Update KDE Applications to latest upstream release, 19.08adridg2019-08-156-8/+15
* Convert to UCL & cleanup pkg-message (categories s)mat2019-08-149-17/+54
* science/py-onnx: fix build with GCC-based architecturespkubaj2019-08-131-1/+1
* science/py-tensorflow-estimator: Add NO_ARCH=yes; Fix build for the port name...yuri2019-08-131-3/+6
* New port: science/py-tensorflow-estimator: TensorFlow Estimator, an API to si...yuri2019-08-136-0/+209
* science/erkale: correctionyuri2019-08-121-1/+1
* science/erkale: Update g20190412 -> g20190812yuri2019-08-124-13/+8
* science/nwchem: Update 6.8.1.20190606 -> 6.8.1.20190809yuri2019-08-122-6/+5
* Add compiler:c++11-lang to USES to fix build on gcc-based architectures:linimon2019-08-111-1/+1
* science/py-ruffus: Update to 2.8.2kai2019-08-112-4/+4
* Update to 2.1.0sunpoet2019-08-102-4/+4
* Revert r508450sunpoet2019-08-103-3/+3
* Fix bulk -a with BUILD_ALL_PYTHON_FLAVORS.mat2019-08-093-3/+3
* science/jmol: Update 14.29.49 -> 14.29.50yuri2019-08-092-4/+4
* New port: science/py-chainer-chemistry: Library for deep learning in biology ...yuri2019-08-094-0/+38
* Fix typo: add missing quotation markssunpoet2019-08-091-1/+1
* science/py-chainer: Remove the irrelevant categoryyuri2019-08-091-1/+1
* New port: science/py-chainer: Deep learning frameworkyuri2019-08-094-0/+41
* Fix RUN_DEPENDS: typing is used for Python 3.4 and belowsunpoet2019-08-092-2/+12
* New port: science/py-onnx: Open Neural Network eXchangeyuri2019-08-095-0/+66
* science/simbody: Backport the pull request that fixed the pathname handling o...yuri2019-08-082-4/+7
* science/simbody: Add the option EXAMPLE_PROGRAMS that builds and installs exa...yuri2019-08-082-4/+28
* science/simbody: Add VISUALIZER_DESC for the VISUALIZER optionyuri2019-08-081-0/+1
* science/lammps: patch_6Aug2019 -> stable_7Aug2019yuri2019-08-082-4/+4
* Re-add science/py-tensorflow: Computation using data flow graphs for scalable...yuri2019-08-0630-0/+731
* science/lammps: Update 2Aug2019 -> 6Aug2019yuri2019-08-062-5/+4
* multimedia/ffmpeg: update to 4.2jbeich2019-08-061-0/+1
* Mark BROKEN: unfetchableantoine2019-08-051-0/+2
* science/dalton: Update 2018.0 -> 2018.2yuri2019-08-042-6/+5
* science/wannier90: Update 2.1.0 -> 3.0.0yuri2019-08-043-24/+16
* science/InsightToolkit: Update to 5.0.1woodsb022019-08-046-297/+223
* science/maeparser: Update 1.1 -> 1.2yuri2019-08-043-7/+5
* Use PYNUMPYsunpoet2019-08-041-1/+1
* Use PYNUMPYsunpoet2019-08-041-1/+1
* Use PYNUMPYsunpoet2019-08-041-1/+1
* science/jdftx: 1.4.2-74 -> 1.5.0yuri2019-08-042-6/+4
* science/dftbplus: Update 18.2 -> 19.1yuri2019-08-045-46/+43
* science/lammps: Update 19Jul2019 -> 2Aug2019yuri2019-08-033-23/+4
* science/py-phonopy: Update 2.1.4 -> 2.2.0yuri2019-08-032-5/+4
* science/py-qcengine: Update 0.7.1 -> 0.8.2yuri2019-08-032-6/+5
* science/metaphysicl: Update 0.5.0 -> 0.5.2yuri2019-08-033-6/+6
* Cosmetic changesunpoet2019-08-031-1/+2
* Hook up science/openkim-models to build.yuri2019-08-031-0/+1
* New port: science/openkim-models: Open Knowledgebase of Interatomic Modelsyuri2019-08-035-0/+444
* science/jmol: Update 14.29.46 -> 14.29.49yuri2019-08-022-4/+4
* science/libkml: fix build with GCC architecturespkubaj2019-08-021-3/+1
* science/wwplot: Update 0.0.4 -> 0.0.6yuri2019-08-012-5/+4
* Bump PORTREVISION for devel/protobuf shlib changesunpoet2019-08-012-2/+2
* science/py-qcelemental: Update 0.4.2 -> 0.5.0yuri2019-07-312-6/+5
* science/smoldyn: Update 2.60 -> 2.61yuri2019-07-312-4/+4
* science/qmcpack: Update 3.7.0 -> 3.8.0yuri2019-07-312-6/+7
* science/simgrid: Update 3.22.2.20190515 -> 3.23.2yuri2019-07-303-7/+6
* science/kim-api: Update 2.1.1 -> 2.1.2yuri2019-07-303-5/+5
* Unbreak bulkantoine2019-07-291-1/+1
* science/py-ase: It is python 3.5+ now.yuri2019-07-291-1/+1
* science/libgeodecomp: fix build with cmake 3.15tcberner2019-07-281-0/+8
* science/py-gsd: Update 1.6.1 -> 1.7.0yuri2019-07-282-5/+4
* science/py-GPy: Update 1.9.6 -> 1.9.8yuri2019-07-282-5/+4
* science/ncnn: fix build with GCC-based architecturespkubaj2019-07-281-1/+1
* science/yoda: Update 1.7.4 -> 1.7.7yuri2019-07-282-5/+4
* Update to 3.47sunpoet2019-07-273-3/+3
* science/kim-api: Update 2.1.0 -> 2.1.1yuri2019-07-273-5/+6
* Bump PORTREVISION for ports depending on the canonical version of GCCgerald2019-07-27204-142/+204
* science/lammps: Update patch_5Jun2019 -> patch_19Jul2019yuri2019-07-273-7/+13
* science/py-ase: Update 3.17.0 -> 3.18.0yuri2019-07-212-5/+4
* science/ncnn: Fix grammar and spelling in pkg-descryuri2019-07-211-8/+8
* New port: science/ncnn: High-performance neural network inference frameworkyuri2019-07-215-0/+59
* science/agrum: Update 0.15.0 -> 0.15.2yuri2019-07-213-9/+11
* New port: science/wwplot: Plotting tool for experimental physics classesyuri2019-07-215-0/+57
* science/paraview: fix build on GCC architecturespkubaj2019-07-201-1/+1
* New port: science/kim-api: Framework for reliable, reproducible, portable mol...yuri2019-07-205-0/+178
* Update to 2.13.0sunpoet2019-07-203-11/+644
* science/kalzium: fix build on GCC architecturespkubaj2019-07-191-1/+2
* science/py-veusz: fix build on GCC architecturespkubaj2019-07-181-1/+1
* - Update math/armadillo to 9.600.4danilo2019-07-181-1/+1
* science/tinker: Update 8.6.1 -> 8.7.1yuri2019-07-144-11/+15
* science/massxpert: prepare for Qt 5.13tcberner2019-07-131-2/+11
* Simplify architecture tests for 64-bit. Listing each ARCH is fragile; e.g.,linimon2019-07-121-2/+2
* KDE Applications: update to 19.04.3tcberner2019-07-122-6/+6
* Prepare for powerpc-on-clang by deleting hard-coded tests for libstdc++.solinimon2019-07-121-2/+4
* New port: science/py-ruffuskai2019-07-124-0/+42
* Update to 0.9.2sunpoet2019-07-112-4/+4
* Update to 1.2.2sunpoet2019-07-082-13/+15
* - Update to 1.0.5tota2019-07-072-5/+4
* - Update to 1.7-2tota2019-07-072-5/+5
* - Update to 2.37tota2019-07-072-5/+4
* - Update to 2.2-8tota2019-07-072-6/+5
* science/py-spglib: Update 1.12.2 -> 1.13.0yuri2019-07-062-4/+4
* Update devel/protobuf to 3.8.0sunpoet2019-07-062-2/+2
* - Update to 3.2.0.stephen2019-07-043-17/+4
* science/dftbplus: Unbreak build with GCC 9tobik2019-07-031-5/+4
* science/PETSc: fix typopkubaj2019-07-021-1/+1
* science/PETSc: fix build with non-x86pkubaj2019-07-021-2/+3
* science/h5z-zfp: Update 0.9.0 -> 1.0.1yuri2019-06-303-22/+13
* science/py-MDAnalysis: fix buildpkubaj2019-06-291-1/+1
* Convert all Go ports to USES=gotobik2019-06-291-1/+1
* science/nest: Update 2.16.0 -> 2.18.0yuri2019-06-284-18/+163
* Remove dupplicate port.mat2019-06-287-993/+0
* science/py-phonopy: Update 2.1.3 -> 2.1.4yuri2019-06-282-5/+5
* science/atompaw: Update 4.1.0.5 -> 4.1.0.6yuri2019-06-282-5/+4
* New port: science/molden: Program for molecular and electronic structure visu...yuri2019-06-287-0/+993
* Cosmetic changesunpoet2019-06-281-2/+1
* Update graphics/libgeotiff to 1.5.1sunpoet2019-06-281-1/+1
* Update Guile to version 2.2.5, modern stable version, and fix dependentdanfe2019-06-274-7/+9
* - Update to 6.1.0 and fix some portswen2019-06-272-2/+5
* Update to 1.5.3sunpoet2019-06-262-4/+4
* KDE Applications: complete dependency liststcberner2019-06-231-1/+2
* Update to 0.113sunpoet2019-06-232-4/+4
* science/qbox: Update 1.67.2 -> 1.67.4yuri2019-06-212-4/+4
* - Simplify XFCE MASTER_SITES usagemadpilot2019-06-201-1/+1
* science/py-qcengine: Update 0.6.4 -> 0.7.1yuri2019-06-192-6/+6
* science/py-qcelemental: Update 0.4.1 -> 0.4.2yuri2019-06-192-4/+4
* science/afni: Upgrade to 19.1.20jwb2019-06-195-48/+4
* Add compiler:c++11-lang to USES to fix the following on GCC-based systems:linimon2019-06-171-1/+1
* Clean up LIB_DEPENDSantoine2019-06-176-6/+6
* science/gromacs: Update 2019.2 -> 2019.3yuri2019-06-162-5/+4
* science/qbox: Update 1.67.1 -> 1.67.2yuri2019-06-132-4/+4
* science/jstrack: remove meaningless 85+ from USES tkgahr2019-06-131-1/+1
* Update to 1.9.7sunpoet2019-06-122-6/+5
* Update to 4.1.2sunpoet2019-06-103-4/+5
* science/lammps: Add the PORTSCOUT=ignore lineyuri2019-06-091-0/+2
* New port: science/smoldyn: Biochemical simulator for molecular diffusion, sur...yuri2019-06-094-0/+41
* science/nifticlib: fix buildpkubaj2019-06-091-0/+1
* science/afni: Upgrade to 19.1.18jwb2019-06-092-4/+4
* science/nwchem: Update 6.8.1.20190509 -> 6.8.1.20190606yuri2019-06-082-6/+6
* Update to 0.9.1sunpoet2019-06-082-4/+4
* science/lammps: Update 31May2019 -> 5Jun2019yuri2019-06-072-4/+4
* science/jmol: Update 14.29.42 -> 14.29.46yuri2019-06-072-4/+4
* Update KDE Applications to 19.04.2tcberner2019-06-072-6/+6
* - Update to 1.7-1tota2019-06-022-5/+4
* - Update devel/gdcm to 3.0.0.stephen2019-06-021-1/+1
* science/afni: Upgrade to 19.1.14jwb2019-06-014-41/+14
* science/py-qcelemental: Update 0.4.0 -> 0.4.1yuri2019-06-012-4/+4
* science/lammps: Update 15May2019 -> 31May2019yuri2019-06-012-4/+4
* Chase devel/openmp expirationantoine2019-05-283-0/+8
* science/py-rmsd: Fix licenseyuri2019-05-271-2/+1
* New port: science/opensph: Library and graphical tools for running SPH and N-...yuri2019-05-268-0/+163
* Update to 4.1.1sunpoet2019-05-262-4/+4
* Update to 2.12.5sunpoet2019-05-263-5/+8
* Add py-eccodes-python 0.9.0sunpoet2019-05-264-0/+43
* science/py-GPy: Fix build by explicitly setting the path to libomp.so in xx_D...yuri2019-05-241-3/+4
* science/afni: Upgrade to 19.1.10jwb2019-05-225-6/+55
* science/wxmacmolplt: fix build with GCC-based architecturespkubaj2019-05-211-1/+2
* science/afni: Upgrade to 19.1.08jwb2019-05-2110-479/+702
* Switch to Python 3.6 and upgrade to v5.3.3.thierry2019-05-203-585/+584
* science/py-phono3py: Fix build on 12/13 (broken due to missing libgomp.so); A...yuri2019-05-201-5/+5
* science/abinit: Fix libomp.so in LDFLAGS (this also might fix the breakage on...yuri2019-05-191-1/+1
* science/dftbplus: Fix libomp.so in LDFLAGS (this also might fix the breakage ...yuri2019-05-191-1/+1
* science/py-phono3py: Unbreak on 13: /usr/lib/libomp.so conflicting with the '...yuri2019-05-191-1/+1
* science/gabedit: Unbreak on 13: /usr/lib/libomp.so conflicting with the 'open...yuri2019-05-191-1/+1
* science/py-GPy: Unbreak on 13: /usr/lib/libomp.so conflicting with the 'openm...yuri2019-05-191-1/+1
* science/openmx: Unbreak on 13: /usr/lib/libomp.so conflicting with the 'openm...yuri2019-05-191-1/+1
* science/esys-particle: Broken on 13-CURRENTyuri2019-05-191-1/+3
* science/chrono: Broken on i386yuri2019-05-191-1/+3
* science/nest: Broken on i386yuri2019-05-191-0/+2
* science/py-paramz: Update 0.9.4 -> 0.9.5yuri2019-05-182-4/+4
* New port: science/libvdwxc: Van der Waals density functional (DFT) libraryyuri2019-05-185-0/+51
* New port: science/simgrid: Simulator of the behavior of large-scale distribut...yuri2019-05-176-0/+178
* science/lammps: Update patch_30Apr2019 -> patch_15May2019yuri2019-05-153-11/+7
* science/py-qcelemental: Update 0.3.3 -> 0.4.0yuri2019-05-152-4/+4
* - Update to 0.20.3wen2019-05-142-5/+4
* science/hypre: Update 2.15.1 -> 2.16.0yuri2019-05-133-11/+9
* science/nest: Update 2.14.0-2100 -> 2.16.0yuri2019-05-123-164/+10
* Cleanup cython dependency.mat2019-05-121-4/+3
* science/nest: PYTHON_USE=python=cython instead of PYTHON_BUILD_DEPENDSyuri2019-05-121-1/+1
* science/coot: Fix build with GCC-based architecturesyuri2019-05-121-2/+2
* science/clipper: add USES=compiler:c++11-langpkubaj2019-05-121-1/+1
* New port: science/nest: Simulator for spiking neural network modelsyuri2019-05-128-0/+644
* science/avogadrolibs: Update 1.92.0 -> 1.92.1yuri2019-05-123-7/+6
* Those ports link against llvm's libomp.soantoine2019-05-111-1/+1
* science/opsin: Update 3.0.20190208 -> 3.0.20190223yuri2019-05-112-7/+7
* science/nwchem: Update 6.8.1.20190412 -> 6.8.1.20190509yuri2019-05-112-6/+5
* science/agrum: Update 0.14.3 -> 0.15.0yuri2019-05-103-10/+10
* science/py-gpaw: Update 1.5.1 -> 1.5.2yuri2019-05-102-5/+4
* science/luscus: fix build with GCC-based architecturespkubaj2019-05-101-1/+1
* Update KDE Applications to 19.04.1tcberner2019-05-102-6/+6
* devel/openmp: phase outjbeich2019-05-0913-9/+13
* science/py-phonopy: Update 2.0.0 -> 2.1.3yuri2019-05-082-5/+5
* science/py-phonopy: 1.13.2.107 -> 2.0.0yuri2019-05-083-6/+5
* science/py-pymatgen: Update 2019.1.24 -> 2019.2.28yuri2019-05-082-4/+4
* science/chrono: Update 2.0.0-9070 -> 4.0.0-89yuri2019-05-054-15/+162
* science/ALPSCore: Fix OPENMPI2 spelling after r500723tobik2019-05-041-1/+1
* science/harminv: Add -fPICyuri2019-05-041-4/+4
* These ports now build on aarch64.linimon2019-05-041-2/+0
* Fix the a ports that were broken but did not know it.mat2019-05-031-4/+4
* compiler.mk is unhappy if CC/CXX is defined before bsd.port.pre.mkadamw2019-05-031-3/+8
* science/apbs: Fix licenseyuri2019-05-031-2/+1
* New port: science/apbs: Electrostatic and solvation properties for complex mo...yuri2019-05-035-0/+773
* science/metaphysicl: Update 0.3.3 -> 0.5.0yuri2019-05-034-7/+8
* science/jmol: Update 14.29.40 -> 14.29.42yuri2019-05-022-4/+4
* New port: science/pagmo2: Platform to perform parallel computations of optimi...yuri2019-05-015-0/+216
* science/lammps: Update patch_29Mar2019 -> patch_30Apr2019yuri2019-05-013-5/+16
* Update to 4.7.0sunpoet2019-05-013-8/+6
* science/libint: Update 1-2-1 -> 1-2-1-15yuri2019-04-292-5/+5
* science/gromacs: Broken on i386yuri2019-04-281-0/+2
* science/jmol: Update to 14.29.38 -> 14.29.40yuri2019-04-282-4/+4
* science/ALPSCore: fix build with GCC-based architecturespkubaj2019-04-271-1/+1
* science/massxpert: fix build with GCC-based architecturespkubaj2019-04-271-1/+1
* Clean up plistantoine2019-04-251-307/+307
* science/chrono: fix build with GCC-based architecturesyuri2019-04-251-1/+11
* Fix on head by setting LLD_UNSAFE:thierry2019-04-251-1/+2
* science/sparta: fix build with GCC-based architecturesyuri2019-04-251-2/+2
* science/sparta: Update 15Feb2019 -> 16Apr2019yuri2019-04-252-4/+4
* Related to revision 499061 bump ports with USES=fortran to have themgerald2019-04-2282-63/+82
* science/jmol: Update 14.29.37 -> 14.29.38yuri2019-04-222-4/+4
* - Update to 3.1.0.stephen2019-04-223-5/+16
* science/kst2:makc2019-04-223-12/+19
* science/qbox: Update 1_66_3 -> 1_67_1yuri2019-04-202-4/+4
* science/gromacs: Update 2019.1 -> 2019.2yuri2019-04-202-5/+5
* science/jmol: Update 14.29.36 -> 14.29.37yuri2019-04-202-4/+4
* Update to 0.112sunpoet2019-04-202-4/+4
generated by cgit (git 2.34.1) at 2024-11-03 01:25:38 +0800