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# $FreeBSD$

PORTNAME=   biom-format
PORTVERSION=    2.1.8
CATEGORIES= biology python
MASTER_SITES=   CHEESESHOP
PKGNAMEPREFIX=  ${PYTHON_PKGNAMEPREFIX}
DISTFILES=  ${DISTNAME}-1${EXTRACT_SUFX}

MAINTAINER= jrm@FreeBSD.org
COMMENT=    Biological Observation Matrix (BIOM) Format Project

LICENSE=    BSD3CLAUSE

BUILD_DEPENDS=  ${PYNUMPY}
RUN_DEPENDS=    ${PYTHON_PKGNAMEPREFIX}click>0:devel/py-click@${PY_FLAVOR} \
        ${PYNUMPY} \
        ${PYTHON_PKGNAMEPREFIX}future>=0.16.0:devel/py-future@${PY_FLAVOR} \
        ${PYTHON_PKGNAMEPREFIX}scipy>=1:science/py-scipy@${PY_FLAVOR} \
        ${PYTHON_PKGNAMEPREFIX}pandas>=0.20.0:math/py-pandas@${PY_FLAVOR} \
        ${PYTHON_PKGNAMEPREFIX}h5py>=2.2.0:science/py-h5py@${PY_FLAVOR} \
        ${PYTHON_PKGNAMEPREFIX}six>=1.10.0:devel/py-six@${PY_FLAVOR}

USES=       python:3.6+
USE_PYTHON= autoplist concurrent cython distutils

.include <bsd.port.pre.mk>

post-extract:
    ${RM} -r ${WRKSRC}/tests

post-install:
    ${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/biom/*.so

.include <bsd.port.post.mk>