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path: root/science/py-pyteomics/Makefile
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PORTNAME=   pyteomics
PORTVERSION=    4.4.2
CATEGORIES= science python
MASTER_SITES=   CHEESESHOP
PKGNAMEPREFIX=  ${PYTHON_PKGNAMEPREFIX}

MAINTAINER= sunpoet@FreeBSD.org
COMMENT=    Python modules for proteomics data analysis

LICENSE=    APACHE20

USES=       python:3.6+
USE_PYTHON= autoplist concurrent distutils

NO_ARCH=    yes

OPTIONS_DEFINE= DF GRAPHICS TDA UNIMOD XML
OPTIONS_DEFAULT=DF GRAPHICS TDA UNIMOD XML
DF_DESC=    DataFrame support
GRAPHICS_DESC=  Graphics support
TDA_DESC=   Target-decoy approach support
UNIMOD_DESC=    Unimod database support
XML_DESC=   XML support 

DF_RUN_DEPENDS=     ${PY_PANDAS}
GRAPHICS_RUN_DEPENDS=   ${PYTHON_PKGNAMEPREFIX}matplotlib>=0:math/py-matplotlib@${PY_FLAVOR}
TDA_RUN_DEPENDS=    ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}
UNIMOD_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
            ${PYTHON_PKGNAMEPREFIX}sqlalchemy13>=0:databases/py-sqlalchemy13@${PY_FLAVOR}
XML_RUN_DEPENDS=    ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
            ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}

.include <bsd.port.mk>