aboutsummaryrefslogtreecommitdiffstats
path: root/science
Commit message (Collapse)AuthorAgeFilesLines
* Update to 1.3.5sunpoet2017-10-032-4/+4
| | | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog https://github.com/Try2Code/cdo-bindings/commits/master
* science/gnudatalanguage: unbreak with gcc6 on 10.*jbeich2017-09-271-0/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | src/CMakeFiles/gdl.dir/GDLInterpreter.cpp.o: In function `GDLInterpreter::l_decinc_dot_expr(ProgNode*, int)': GDLInterpreter.cpp:(.text+0x4c24): undefined reference to `operator delete(void*, unsigned int)' GDLInterpreter.cpp:(.text+0x4f51): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/GDLInterpreter.cpp.o: In function `GDLInterpreter::l_arrayexpr_mfcall_as_arrayexpr(ProgNode*, BaseGDL*)': GDLInterpreter.cpp:(.text+0x51e9): undefined reference to `operator delete(void*, unsigned int)' GDLInterpreter.cpp:(.text+0x5442): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/GDLInterpreter.cpp.o: In function `GDLInterpreter::l_arrayexpr_mfcall(ProgNode*, BaseGDL*)': GDLInterpreter.cpp:(.text+0x5ab2): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/GDLInterpreter.cpp.o:GDLInterpreter.cpp:(.text._ZN5antlr15CharInputBufferD0Ev[_ZN5antlr15CharInputBufferD5Ev]+0x5d): more undefined references to `operator delete(void*, unsigned int)' follow src/CMakeFiles/gdl.dir/basic_fun.cpp.o: In function `ForInfoListT<ForLoopInfoT, 32ull>::resize(unsigned long long)': basic_fun.cpp:(.text._ZN12ForInfoListTI12ForLoopInfoTLy32EE6resizeEy[_ZN12ForInfoListTI12ForLoopInfoTLy32EE6resizeEy]+0x17e): undefined reference to `operator delete[](void*, unsigned int)' src/CMakeFiles/gdl.dir/dcommon.cpp.o: In function `DCommon::~DCommon()': dcommon.cpp:(.text+0xf5): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/dcommon.cpp.o: In function `DCommon::~DCommon()': dcommon.cpp:(.text+0x154): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/dcommon.cpp.o: In function `DCommonRef::~DCommonRef()': dcommon.cpp:(.text+0x3fd): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/dcommon.cpp.o: In function `DCommon::AddVar(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)': dcommon.cpp:(.text+0x482): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/dcompiler.cpp.o: In function `DCompiler::ForwardFunction(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)': dcompiler.cpp:(.text+0x226): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/dcompiler.cpp.o:dcompiler.cpp:(.text+0x314): more undefined references to `operator delete(void*, unsigned int)' follow src/CMakeFiles/gdl.dir/envt.cpp.o: In function `ForInfoListT<ForLoopInfoT, 32ull>::~ForInfoListT()': envt.cpp:(.text._ZN12ForInfoListTI12ForLoopInfoTLy32EED2Ev[_ZN12ForInfoListTI12ForLoopInfoTLy32EED5Ev]+0x76): undefined reference to `operator delete[](void*, unsigned int)' src/CMakeFiles/gdl.dir/envt.cpp.o: In function `EnvUDT::~EnvUDT()': envt.cpp:(.text._ZN6EnvUDTD2Ev[_ZN6EnvUDTD5Ev]+0xca): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/extrat.cpp.o: In function `ExtraT::ResolveExtra(EnvBaseT*)': extrat.cpp:(.text+0x1aaa): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/fmtnode.cpp.o: In function `FMTNode::~FMTNode()': fmtnode.cpp:(.text+0x44): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/gdlexception.cpp.o: In function `WarnAboutObsoleteRoutine(antlr::ASTRefCount<DNode>, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)': gdlexception.cpp:(.text+0x1c6f): undefined reference to `operator delete(void*, unsigned int)' gdlexception.cpp:(.text+0x1eab): undefined reference to `operator delete(void*, unsigned int)' src/CMakeFiles/gdl.dir/gdlxstream.cpp.o:gdlxstream.cpp:(.text._ZN10GDLXStreamD0Ev[_ZN10GDLXStreamD5Ev]+0x1d): more undefined references to `operator delete(void*, unsigned int)' follow PR: 219300 Reported by: pkg-fallout Submitted by: rakuco
* devel/google{test,mock}: update to 1.8.0.358jbeich2017-09-254-4/+4
| | | | Changes: https://github.com/google/googletest/compare/59c795c...f1a87d7
* devel/boost-*: update to 1.65.1jbeich2017-09-2511-11/+11
| | | | | | | | | Changes: http://www.boost.org/users/history/version_1_65_1.html PR: 218835 Approved by: maintainer timeout (1.65.1: 2 weeks; 1.65.0: 1 month) Tested by: jhibbits (on powerpc64, earlier version) Exp-run by: antoine Differential Revision: https://reviews.freebsd.org/D11582
* devel/boost-*: enable C++11 featuresjbeich2017-09-2511-11/+11
| | | | | | | | PR: 218835 Obtained from: https://github.com/DragonFlyBSD/DeltaPorts/pull/690 Approved by: maintainer timeout (2 months) Exp-run by: antoine Differential Revision: https://reviews.freebsd.org/D11582
* Update to 1.14.2sunpoet2017-09-252-4/+4
| | | | | Changes: https://github.com/pysal/pysal/releases https://github.com/pysal/pysal/blob/master/CHANGELOG.txt
* Update LICENSEsunpoet2017-09-251-2/+1
|
* science/InsightToolkit: Update to 4.12.2woodsb022017-09-233-4/+5
| | | | | Changes this release: https://public.kitware.com/pipermail/community/2017-September/013607.html
* Remove USES=execinfo.mat2017-09-223-3/+2
| | | | | | | PR: 220271 Submitted by: mat (review), Yasuhiro KIMURA (PR) Sponsored by: Absolight Differential Revision: https://reviews.freebsd.org/D11488
* science/py-netCDF4: Update version 1.2.7=>1.2.9bofh2017-09-202-6/+11
| | | | - Conditional installation of DOCS and EXAMPLES
* Fix license information for portgs that use "the same license as Perl".mat2017-09-155-5/+5
| | | | Sponsored by: Absolight
* Bump PORTREVISION for ports depending on the canonical version of GCCgerald2017-09-1139-33/+39
| | | | | | | | | | | | | | (via Mk/bsd.default-versions.mk and lang/gcc) which has moved from GCC 5.4 to GCC 6.4 under most circumstances. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang, c++14-lang, c++0x, c11, or gcc-c++11-lib. PR: 219275
* - Add new port: science/R-cran-kernlabtota2017-09-104-0/+27
| | | | | | | | | | Kernel-based machine learning methods for classification, regression, clustering, novelty detection, quantile regression and dimensionality reduction. Among other methods 'kernlab' includes Support Vector Machines, Spectral Clustering, Kernel PCA, Gaussian Processes and a QP solver. WWW: https://cran.r-project.org/web/packages/kernlab/
* Update to 1.3.4sunpoet2017-09-092-4/+4
| | | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog https://github.com/Try2Code/cdo-bindings/commits/master
* Update to 1.3.4sunpoet2017-09-092-4/+4
| | | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog https://github.com/Try2Code/cdo-bindings/commits/master
* Update to 1.9.0sunpoet2017-09-095-14/+26
| | | | Changes: https://code.zmaw.de/news/380
* - Update to 2.19tota2017-08-282-5/+4
|
* Update to 1.23.1sunpoet2017-08-272-4/+4
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* Revert r447879.rakuco2017-08-271-0/+1
| | | | | | | | | Apparently the build is indeed broken with parallel jobs, even though I wasn't able to reproduce it in my tests. Checking what's broken would take time and anyone interested in that should rather try updating the port to 3.6.0. PR: 219293 Reported by: John Marino <freebsdml@marino.st>
* Add LICENSEsunpoet2017-08-261-0/+5
|
* science/InsightToolkit: Update to 4.12.1woodsb022017-08-242-4/+4
| | | | | Changes this release: http://public.kitware.com/pipermail/community/2017-August/013534.html
* Bump PORTREVISION to reflect print/gl2ps changes.araujo2017-08-241-1/+1
| | | | | PR: ports/218399 (based on) Submitted by: emaste
* - Update to 0.54culot2017-08-222-4/+5
| | | | Changes: http://search.cpan.org/dist/Physics-Unit/Changes
* Update GNUstep core libraries.theraven2017-08-2120-10/+149
| | | | | | | | | | Update the default Objective-C compiler. Fix various build failures in GNUstep ports from newer versions of the GNUstep core libraries and from changes to GNUstep Make. Update various ports that use GNUstep and bump the portrevision of the ones that haven't had a new release.
* Pet portlint: move BROKEN_* upwardsunpoet2017-08-201-2/+2
|
* Backport a patch to fix the build with GCC 6.rakuco2017-08-161-0/+22
| | | | | | | Obtained from: https://sourceforge.net/p/gnudatalanguage/bugs/688/#4622 PR: 219300 Approved by: thierry (maintainer)
* Ad TensorFlow 1.2.1lwhsu2017-08-1510-0/+7761
| | | | | PR: 219609 Submitted by: Jov <amutu@amutu.com>
* science/gramps: Update to 4.2.6woodsb022017-08-142-4/+4
| | | | | Changes this release: https://gramps-project.org/introduction-WP/2017/08/gramps-4-2-6-released/
* Drop MAKE_JOBS_UNSAFE.rakuco2017-08-131-1/+0
| | | | | | Tentatively remove it after testing the port with -j2 and -jLOTS_OF_CORES. PR: 219293
* Add patch to drop a wrong ';' in an if check.rakuco2017-08-132-1/+20
| | | | | | | | | | | | | | | In addition to fixing an actual bug, this also fixes the build with GCC 6: /wrkdirs/usr/ports/science/massxpert/work/massxpert-3.4.0/lib/propListHolder.cpp: In member function 'bool massXpert::PropListHolder::removeProp(const QString&)': /wrkdirs/usr/ports/science/massxpert/work/massxpert-3.4.0/lib/propListHolder.cpp:216:2: error: this 'if' clause does not guard... [-Werror=misleading-indentation] if(m_propList.at(iter)->name() == name); ^~ /wrkdirs/usr/ports/science/massxpert/work/massxpert-3.4.0/lib/propListHolder.cpp:217:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if' { PR: 219293 Approved by: maintainer timeout (vg, 18 days) MFH: 2017Q3
* - Update The Glorious Glasgow Haskell Compiler to version 8.0.2tcberner2017-08-091-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Simplified port by only suporting GCC, and creating a build.mk file - Update Pandoc to 1.19.2.1 - Update git-annex to 6.20170520 - Update Darcs to 2.12.5 - Update Gtk2Hs to 0.13.2.2 - Update Agda to 2.5.2 Please note that port revisions for all the Haskell ports without version changes are bumped. See the UPDATING file for instructions. New ports (63): hs-EdisonAPI API for EdisonCore hs-EdisonCore Efficent, purely-functional data structures hs-ListLike Generic support for list-like structures hs-Only Canonical anonymous 1-tuple type hs-aeson-compat Compatibility layer for aeson hs-attoparsec-iso8601 Parsing of ISO 8601 dates hs-base-compat Compatibility with later versions of base hs-call-stack Support call stacks hs-clock Access to high-resolution clocks and timers hs-code-page Adjusting code pages on Windows hs-colour Data type for colors and transparency hs-concurrent-output Ungarble output from several threads hs-cryptohash-md5 Pure MD5 implementation hs-cryptohash-sha1 Pure SHA-1 implementation hs-cryptohash-sha256 Pure SHA-256 implementation hs-data-endian Endian-sensitive data hs-dbus Client for the D-Bus IPC system hs-disk-free-space Retrieving information about disk space usage hs-doctemplates Pandoc-style document templates hs-ed25519 Ed25519 public-key signature system hs-fdo-notify FreeDesktop.org's Desktop Notifications hs-fixed Signed 15.16 precision fixed point arithmetic hs-fmlist FoldMap lists hs-foundation Custom Prelude hs-gitrev Compile-time git revision info hs-graphviz Binding for the GraphViz library hs-hackage-security Tools for securing the Hackage package server hs-half Half-precision floating-point hs-haskell-lexer Fully compliant Haskell 98 lexer hs-http-api-data Converting types to and from HTTP API data hs-integer-logarithms Integer logarithms implementation hs-io-streams Easy-to-use primitives for I/O using streams hs-io-streams-haproxy HAProxy protocol version 1.5 support hs-magic Binding to the libmagic library hs-microlens Microlens hs-microlens-th Automated generation of lenses hs-microstache Mustache templates hs-monad-unlift Type classes for unlifting monad transformers hs-monadplus Partial maps and filters over MonadPlus hs-mono-traversable-instances Extra type classes for mono-traversable hs-mountpoints Listing currently mounted filesystems hs-newtype-generics Full replacement of newtype hs-pretty-show Working with derived Show instances hs-process-extras Read process input/output as ByteString/Text hs-psqueues Priority Search Queues hs-readable Reading data types from ByteString/Text hs-refact Data type for apply-refact hs-regex-pcre PCRE backend to accompany regex-base hs-safe-exceptions Safe, consistent, and easy exception handling hs-say Send messages to handles in a thread-safe way hs-scanner Incremental combinator parser for ByteStrings hs-skylighting Syntax highlighting library binding hs-terminal-size Get terminal window sizes without ncurses hs-text-short Data type for keeping short strings in memory hs-th-abstraction Inspecting types via Template Haskell hs-th-lift Derive Template Haskell's Lift class hs-th-lift-instances Orphan instances for commonly used types hs-tls-session-manager TLS session manager hs-typed-process Launching/interaction with external processes hs-unexceptionalio IO without non-error/synchronous exceptions hs-uri-bytestring RFC3986 compliant URI parser hs-uri-bytestring-aeson Aeson instance for URI.ByteString hs-wl-pprint-text Version of wl-pprint to use Text Updated ports (314): hs-ALUT 2.4.0.0_1 --> 2.4.0.2 hs-Agda 2.4.2.3 --> 2.5.2 hs-Agda-stdlib 0.9_1 --> 0.13 hs-BNFC 2.8 --> 2.8.1 hs-Boolean 0.2.3 --> 0.2.4 hs-DAV 1.0.7 --> 1.3.1 hs-DRBG 0.5.4 --> 0.5.5 hs-Diff 0.3.2 --> 0.3.4 hs-GLURaw 1.5.0.1 --> 2.0.0.3 hs-GLUT 2.7.0.1_1,1 --> 2.7.0.12,1 hs-Glob 0.7.5_2 --> 0.8.0 hs-HStringTemplate 0.8.3 --> 0.8.6 hs-HTTP 4000.2.20 --> 4000.3.7 hs-HUnit 1.2.5.2_7 --> 1.6.0.0 hs-HaXml 1.25.3 --> 1.25.4 hs-HsOpenSSL 0.11.1.1 --> 0.11.4.9 hs-JuicyPixels 3.2.6 --> 3.2.8.2 hs-List 0.5.2 --> 0.6.0 hs-MemoTrie 0.6.2_2 --> 0.6.8 hs-MissingH 1.3.0.1 --> 1.4.0.1 hs-MonadRandom 0.4 --> 0.5.1 hs-ObjectName 1.1.0.0 --> 1.1.0.1 hs-OpenAL 1.7.0.0 --> 1.7.0.4 hs-OpenGL 2.12.0.1,1 --> 3.0.2.0,1 hs-OpenGLRaw 2.5.1.0_1 --> 3.2.4.0 hs-QuickCheck 2.8.1 --> 2.10.0.1 hs-RSA 2.1.0.1 --> 2.3.0 hs-ReadArgs 1.2.2 --> 1.2.3 hs-STMonadTrans 0.3.3 --> 0.4.3 hs-StateVar 1.1.0.1 --> 1.1.0.4 hs-TypeCompose 0.9.10_2 --> 0.9.12 hs-activehs 0.3.1_12 --> 0.3.2 hs-activehs-base 0.3.0.2_9 --> 0.3.0.4 hs-adjunctions 4.2.1 --> 4.3 hs-aeson 0.8.0.2 --> 1.2.1.0 hs-aeson-pretty 0.7.2 --> 0.8.5 hs-alex 3.1.4 --> 3.2.1 hs-ansi-terminal 0.6.2.1 --> 0.6.3.1 hs-asn1-data 0.7.1_9 --> 0.7.2 hs-asn1-encoding 0.9.0 --> 0.9.5 hs-asn1-parse 0.9.1 --> 0.9.4 hs-asn1-types 0.3.0 --> 0.3.2 hs-async 2.0.2 --> 2.1.1.1 hs-atomic-primops 0.8 --> 0.8.0.4 hs-attoparsec 0.12.1.6 --> 0.13.1.0 hs-authenticate 1.3.2.11 --> 1.3.3.2 hs-auto-update 0.1.2.2 --> 0.1.4 hs-aws 0.12.1 --> 0.16 hs-base-orphans 0.4.4 --> 0.6 hs-basic-prelude 0.5.0 --> 0.6.1.1 hs-bifunctors 5 --> 5.4.2 hs-blaze-builder 0.4.0.1 --> 0.4.0.2 hs-blaze-html 0.8.1.0 --> 0.9.0.1 hs-blaze-markup 0.7.0.2 --> 0.8.0.0 hs-brainfuck 0.1.0.2 --> 0.1.0.3 hs-c2hs 0.28.1_1 --> 0.28.2_1 hs-cabal-install 1.22.6.0 --> 1.24.0.2 hs-cairo 0.13.1.0 --> 0.13.3.1 hs-case-insensitive 1.2.0.4 --> 1.2.0.10 hs-cassava 0.4.3.1 --> 0.5.0.0 hs-cereal 0.4.1.1 --> 0.5.4.0 hs-cgi 3001.2.2.2,1 --> 3001.3.0.2,1 hs-checkers 0.4.3 --> 0.4.7 hs-chunked-data 0.2.0 --> 0.3.0 hs-cipher-aes128 0.7.0.1 --> 0.7.0.3 hs-classy-prelude 0.12.1.1 --> 1.2.0.1 hs-classy-prelude-conduit 0.12.0.1 --> 1.2.0 hs-clientsession 0.9.1.1 --> 0.9.1.2 hs-cmark 0.4.0.1 --> 0.5.5.1 hs-cmdargs 0.10.13 --> 0.10.17 hs-comonad 4.2.7.2 --> 5.0.1 hs-conduit 1.2.5 --> 1.2.11 hs-conduit-combinators 1.0.3 --> 1.1.1 hs-conduit-extra 1.1.9.1 --> 1.1.16 hs-connection 0.2.5 --> 0.2.8 hs-constraints 0.4.1.3 --> 0.9.1 hs-contravariant 1.3.2 --> 1.4 hs-cookie 0.4.1.6 --> 0.4.2.1 hs-cpphs 1.19 --> 1.20.8 hs-criterion 1.1.0.0 --> 1.2.1.0 hs-cryptohash 0.11.6_2 --> 0.11.9 hs-cryptohash-cryptoapi 0.1.3_2 --> 0.1.4 hs-cryptonite 0.6 --> 0.24 hs-css-text 0.1.2.1_2 --> 0.1.2.2 hs-darcs 2.10.1 --> 2.12.5 hs-data-default 0.5.3_7 --> 0.7.1.1 hs-data-default-class 0.0.1_7 --> 0.1.2.0 hs-data-default-instances-base 0.0.1_7 --> 0.1.0.1 hs-data-lens 2.10.7 --> 2.11.1 hs-data-lens-template 2.1.9 --> 2.2 hs-data-pprint 0.2.4 --> 0.2.4.1 hs-deepseq-generics 0.1.1.2 --> 0.2.0.0 hs-dia-base 0.1.1.3 --> 0.1.1.4 hs-directory-tree 0.12.0_2 --> 0.12.1 hs-distributive 0.4.4_2 --> 0.5.2 hs-dlist 0.7.1.1 --> 0.8.0.3 hs-dlist-instances 0.1_2 --> 0.1.1.1 hs-dns 2.0.0 --> 2.0.10 hs-double-conversion 2.0.1.0 --> 2.0.2.0 hs-either 4.4.1 --> 4.4.1.1 hs-ekg 0.4.0.8 --> 0.4.0.13 hs-ekg-core 0.1.1.0 --> 0.1.1.1 hs-ekg-json 0.1.0.0 --> 0.1.0.5 hs-email-validate 2.1.3 --> 2.3 hs-enclosed-exceptions 1.0.1.1 --> 1.0.2 hs-entropy 0.3.7 --> 0.3.8 hs-equivalence 0.3.1 --> 0.3.2 hs-errors 2.0.0 --> 2.2.1 hs-esqueleto 2.4.1 --> 2.5.3 hs-exceptions 0.8.0.2 --> 0.8.3 hs-extra 1.4.1 --> 1.6 hs-fast-logger 2.4.1 --> 2.4.10 hs-feed 0.3.10.0 --> 0.3.12.0 hs-fgl 5.5.2.1 --> 5.5.3.1 hs-file-embed 0.0.9 --> 0.0.10 hs-filestore 0.6.1 --> 0.6.3.1 hs-free 4.12.1 --> 4.12.4 hs-gconf 0.13.0.2 --> 0.13.1.0 hs-generic-deriving 1.8.0 --> 1.11.2 hs-geniplate-mirror 0.7.1 --> 0.7.5 hs-ghc-events 0.4.4.0 --> 0.6.0 hs-gio 0.13.1.0 --> 0.13.3.1 hs-git-annex 5.20150727_1 --> 6.20170520 hs-gitit 0.11.1 --> 0.12.2.1 hs-glib 0.13.1.1 --> 0.13.4.1 hs-gnuidn 0.2.1_3 --> 0.2.2 hs-gtk 0.13.9 --> 0.14.6 hs-gtk2hs 0.13,1 --> 0.13.2.2,1 hs-gtk2hs-buildtools 0.13.0.4_1 --> 0.13.2.2 hs-gtksourceview2 0.13.1.3 --> 0.13.3.1 hs-haddock 2.16.1 --> 2.17.5 hs-haddock-api 2.16.1 --> 2.17.4 hs-haddock-library 1.2.1 --> 1.4.3 hs-happstack-server 7.4.4 --> 7.4.6.4 hs-hashable 1.2.3.3,1 --> 1.2.6.1,1 hs-hashtables 1.2.0.2 --> 1.2.1.1 hs-haskell-src-exts 1.16.0.1 --> 1.19.1 hs-hasktags 0.69.1 --> 0.69.3 hs-hedis 0.6.9 --> 0.9.8 hs-heist 0.14.1.1 --> 1.0.1.0 hs-hexpat 0.20.9 --> 0.20.13 hs-highlighting-kate 0.6 --> 0.6.4 hs-hinotify 0.3.8.1 --> 0.3.9 hs-hint 0.4.2.3 --> 0.7.0 hs-hjsmin 0.1.5.0 --> 0.2.0.2 hs-hlint 1.9.21 --> 2.0.9 hs-hoauth2 0.4.8 --> 0.5.9 hs-hoogle 4.2.41 --> 5.0.12 hs-hourglass 0.2.9 --> 0.2.10 hs-hscolour 1.23,1 --> 1.24.1,1 hs-hslogger 1.2.9 --> 1.2.10 hs-hslua 0.4.0 --> 0.5.0 hs-hspec 2.1.10 --> 2.4.4 hs-hspec-core 2.1.10 --> 2.4.4 hs-hspec-discover 2.1.10 --> 2.4.4 hs-hspec-expectations 0.7.1 --> 0.8.2 hs-html-conduit 1.2.0 --> 1.2.1.1 hs-http-client 0.4.20 --> 0.5.7.0 hs-http-client-tls 0.2.2_2 --> 0.3.5.1 hs-http-conduit 2.1.8 --> 2.2.3.1 hs-http-reverse-proxy 0.4.2 --> 0.4.4 hs-http-types 0.8.6 --> 0.9.1 hs-http2 1.0.4 --> 1.6.3 hs-hxt 9.3.1.15 --> 9.3.1.16 hs-hxt-regex-xmlschema 9.2.0.2 --> 9.2.0.3 hs-ieee754 0.7.6 --> 0.8.0 hs-iproute 1.5.0 --> 1.7.1 hs-js-jquery 1.11.3 --> 3.2.1 hs-kan-extensions 4.2.2 --> 5.0.2 hs-keys 3.10.2 --> 3.11 hs-kqueue 0.1.2.6_2 --> 0.2 hs-language-c 0.5.0 --> 0.6.1 hs-language-javascript 0.5.14.2 --> 0.6.0.10 hs-largeword 1.2.3_2 --> 1.2.5 hs-lens 4.12.3 --> 4.15.3 hs-libmpd 0.9.0.2 --> 0.9.0.6 hs-lifted-async 0.7.0.1 --> 0.9.3 hs-lifted-base 0.2.3.6 --> 0.2.3.11 hs-map-syntax 0.2 --> 0.2.0.2 hs-math-functions 0.1.5.2_2 --> 0.2.1.0 hs-memory 0.8 --> 0.14.6 hs-mime-mail 0.4.9 --> 0.4.13.1 hs-mime-types 0.1.0.6 --> 0.1.0.7 hs-mmorph 1.0.4 --> 1.1.0 hs-monad-control 1.0.0.4 --> 1.0.2.1 hs-monad-logger 0.3.13.2 --> 0.3.24 hs-monad-par 0.3.4.7 --> 0.3.4.8 hs-monadcryptorandom 0.6.1_2 --> 0.7.1 hs-monads-tf 0.1.0.2_2 --> 0.1.0.3 hs-mono-traversable 0.9.2.1 --> 1.0.2 hs-mueval 0.9.1.1.2 --> 0.9.3 hs-murmur-hash 0.1.0.8 --> 0.1.0.9 hs-mutable-containers 0.3.2 --> 0.3.3 hs-mwc-random 0.13.3.2 --> 0.13.6.0 hs-mysql 0.1.1.8 --> 0.1.4 hs-network 2.6.2.1 --> 2.6.3.2 hs-network-info 0.2.0.7 --> 0.2.0.8 hs-network-multicast 0.1.0 --> 0.2.0 hs-network-uri 2.6.0.3 --> 2.6.1.0 hs-nonce 1.0.2 --> 1.0.4 hs-oeis 0.3.6 --> 0.3.9 hs-optparse-applicative 0.11.0.2 --> 0.14.0.0 hs-pandoc 1.15.0.6_1 --> 1.19.2.1 hs-pandoc-citeproc 0.7.3.1 --> 0.10.5.1 hs-pandoc-types 1.12.4.5 --> 1.19 hs-pango 0.13.1.0 --> 0.13.3.1 hs-parallel 3.2.0.6 --> 3.2.1.1 hs-parsec 3.1.9 --> 3.1.11 hs-path-pieces 0.2.0 --> 0.2.1 hs-pcre-light 0.4.0.3 --> 0.4.0.4 hs-persistent 2.2 --> 2.7.0 hs-persistent-sqlite 2.2 --> 2.6.2 hs-persistent-template 2.1.3.4 --> 2.5.2 hs-pointed 4.2.0.2 --> 5 hs-polyparse 1.11 --> 1.12 hs-prelude-extras 0.4_2 --> 0.4.0.3 hs-primitive 0.6 --> 0.6.2.0 hs-probability 0.2.4.1_2 --> 0.2.5.1 hs-profunctors 5.1.1 --> 5.2 hs-pureMD5 2.1.2.1_10 --> 2.1.3 hs-quickcheck-io 0.1.1_2 --> 0.2.0 hs-reflection 2 --> 2.1.2 hs-regex-applicative 0.3.2.1 --> 0.3.3 hs-regex-tdfa 1.2.0_2 --> 1.2.2 hs-resourcet 1.1.6 --> 1.1.9 hs-safe 0.3.9 --> 0.3.15 hs-sandi 0.3.5 --> 0.4.0 hs-scientific 0.3.3.8 --> 0.3.5.1 hs-semigroupoids 5.0.0.3 --> 5.2 hs-semigroups 0.16.2.2 --> 0.18.3 hs-setlocale 1.0.0.4 --> 1.0.0.5 hs-shake 0.15.5 --> 0.15.11 hs-shakespeare 2.0.5 --> 2.0.13 hs-shelly 1.6.3.3 --> 1.6.8.3 hs-simple-sendfile 0.2.21 --> 0.2.25 hs-skein 1.0.9.3 --> 1.0.9.4 hs-snap 0.14.0.6 --> 1.0.0.1 hs-snap-core 0.9.7.2 --> 1.0.2.1 hs-snap-server 0.9.5.1 --> 1.0.2.2 hs-socks 0.5.4_2 --> 0.5.5 hs-split 0.2.2_7 --> 0.2.3.2 hs-statistics 0.13.2.3 --> 0.14.0.2 hs-stm 2.4.4 --> 2.4.4.1 hs-streaming-commons 0.1.12.1 --> 0.1.18 hs-svgcairo 0.13.0.3 --> 0.13.1.1 hs-syb 0.5.1 --> 0.7 hs-syb-with-class 0.6.1.6 --> 0.6.1.7 hs-tagged 0.8.1 --> 0.8.5 hs-tagsoup 0.13.3 --> 0.14.1 hs-tar 0.4.2.1 --> 0.5.0.3 hs-temporary 1.2.0.3_2 --> 1.2.1 hs-test-framework-hunit 0.3.0.1_2 --> 0.3.0.2 hs-test-framework-quickcheck2 0.3.0.3_2 --> 0.3.0.4 hs-texmath 0.8.3 --> 0.9.4.1 hs-text 1.2.1.3 --> 1.2.2.2 hs-threads 0.5.1.3 --> 0.5.1.4 hs-threadscope 0.2.7 --> 0.2.8 hs-time-locale-compat 0.1.1.0 --> 0.1.1.3 hs-timezone-olson 0.1.7 --> 0.1.8 hs-timezone-series 0.1.5.1 --> 0.1.8 hs-tls 1.3.1 --> 1.3.11 hs-torrent 10000.0.0 --> 10000.1.1 hs-transformers-compat 0.4.0.4 --> 0.5.1.4 hs-unix-compat 0.4.1.4 --> 0.4.3.1 hs-unix-time 0.3.5 --> 0.3.7 hs-unlambda 0.1.4.1 --> 0.1.4.2 hs-unordered-containers 0.2.5.1 --> 0.2.8.0 hs-uri 0.1.6.3 --> 0.1.6.4 hs-utf8-string 1 --> 1.0.1.1 hs-utility-ht 0.0.10_2 --> 0.0.14_2 hs-uuid 1.3.11 --> 1.3.13 hs-uuid-types 1.0.2 --> 1.0.3 hs-uulib 0.9.20 --> 0.9.22 hs-vault 0.3.0.4 --> 0.3.0.7 hs-vector 0.10.12.3 --> 0.12.0.1 hs-vector-binary-instances 0.2.1.0_2 --> 0.2.3.5 hs-vector-instances 3.3.1 --> 3.4 hs-vector-space 0.10.2 --> 0.10.4 hs-vector-th-unbox 0.2.1.2 --> 0.2.1.6 hs-void 0.7 --> 0.7.2 hs-vte 0.13.0.2 --> 0.13.1.1 hs-wai 3.0.3.0 --> 3.2.1.1 hs-wai-app-static 3.1.1 --> 3.1.6.1 hs-wai-extra 3.0.10 --> 3.0.20.0 hs-wai-logger 2.2.4.1 --> 2.3.0 hs-warp 3.1.3 --> 3.2.13 hs-warp-tls 3.1.1 --> 3.2.4 hs-webkit 0.13.1.3 --> 0.14.2.1 hs-wx 0.91.0.0 --> 0.92.3.0 hs-wxc 0.91.0.0 --> 0.92.3.0 hs-wxcore 0.91.0.0 --> 0.92.3.0 hs-wxdirect 0.91.0.0 --> 0.92.3.0 hs-x509 1.6.0 --> 1.6.5 hs-x509-store 1.6.0 --> 1.6.2 hs-x509-system 1.6.0 --> 1.6.4 hs-x509-validation 1.6.0 --> 1.6.5 hs-xml-conduit 1.3.1 --> 1.5.1 hs-xml-hamlet 0.4.0.11 --> 0.4.1 hs-xmlhtml 0.2.3.4 --> 0.2.4 hs-xmobar 0.24.3 --> 0.24.5 hs-xss-sanitize 0.3.5.6 --> 0.3.5.7 hs-yaml 0.8.13 --> 0.8.23.1 hs-yesod 1.4.1.5 --> 1.4.5 hs-yesod-auth 1.4.6 --> 1.4.17.2 hs-yesod-auth-hashdb 1.4.2.2 --> 1.6.1 hs-yesod-bin 1.4.13.3 --> 1.5.2.3 hs-yesod-core 1.4.13 --> 1.4.35 hs-yesod-form 1.4.4.1 --> 1.4.12 hs-yesod-persistent 1.4.0.3 --> 1.4.2 hs-yesod-static 1.5.0.2 --> 1.5.3 hs-yesod-test 1.4.3.1 --> 1.5.7 hs-zip-archive 0.2.3.7 --> 0.3.1.1 hs-zlib 0.5.4.2 --> 0.6.1.2 scroll 1.20151219 --> 1.20170122 Removed ports (5): hs-MonadCatchIO-mtl Deprecated in favor of exceptions hs-MonadCatchIO-transformers Deprecated in favor of exceptions hs-citeproc-hs Replaced by pandoc-citeproc hs-directory Part of the packages shipped with GHC hs-syb-with-class-instances-text Upstream is unmaintained This was created together with pgj@. Reviewed by: pgj, 6yearold_gmail.com Differential Revision: https://reviews.freebsd.org/D11558
* - Update to 3.1.0.1wen2017-08-082-4/+4
|
* Update to 1.072sunpoet2017-08-082-4/+5
| | | | | | - Add NO_ARCH Changes: http://search.cpan.org/dist/Chemistry-Elements/Changes
* Update math/libqalculate to 1.0.0ajhale2017-08-031-1/+1
| | | | | Update math/qalculate to 1.0.0 Bump PORTREVISION on dependent ports (shlib bump in libqalculate)
* Update to 1.14.1sunpoet2017-07-302-4/+4
| | | | | | Changes: https://github.com/pysal/pysal/releases https://github.com/pysal/pysal/blob/master/CHANGELOG.txt https://github.com/pysal/pysal/commits/dev
* Update WWW.rakuco2017-07-271-1/+1
| | | | The massxpert.org domain no longer belongs to the project.
* - Update to 1.13wen2017-07-266-49/+28
| | | | | | | - Update WWW PR: 220994 Submitted by: aehlig@linta.de(maintainer)
* Give maintainership of science/avogadro to kde@ as kalzium is the only consumer.tcberner2017-07-251-1/+1
|
* After r446199 libR.so has SONAME and was made visible forpawel2017-07-251-4/+3
| | | | | | | | | | | | consumer ports. Register correct dependency by using LIB_DEPENDS instead of BUILD|RUN_DEPENDS dance. math/rkward-kde4: - Add 2 missing files to pkg-plist also PR: 219776 Submitted by: myself Approved by: maintainers timeouts
* Update to 1.0.1sunpoet2017-07-233-7/+8
| | | | | | - Update LICENSE_FILE Changes: https://gitlab.dkrz.de/k202009/libaec/blob/master/CHANGELOG.md
* Update to 1.14.0sunpoet2017-07-152-4/+4
| | | | | Changes: https://github.com/pysal/pysal/releases https://github.com/pysal/pysal/blob/master/CHANGELOG.txt
* - Add missing dependencytota2017-07-061-1/+3
| | | | Reported by: pkg-fallout
* * Updated to 1.7.2ultima2017-07-056-128/+26
| | | | | | | | | | | | | * New maintainer Jov <amutu@amutu.com> * Sorted options Changelog: https://www.mbdyn.org/userfiles/downloads/CHANGELOG-1.7.txt PR: 220157 Submitted by: Jov <amutu@amutu.com> (maintainer), pfg Reviewed by: matthew (mentor), matt Approved by: matthew (mentor) Differential Revision: https://reviews.freebsd.org/D11481
* Update to 1.23.0sunpoet2017-07-042-4/+4
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* Update math/gsl to 2.4tcberner2017-07-047-6/+7
| | | | | Exp-Run by: antoine PR: 220408
* - Update to 2.16tota2017-07-032-4/+4
|
* Update to 3.4.2sunpoet2017-07-032-5/+5
| | | | | | - Sort USE_PYTHON Changes: https://bitbucket.org/levitsky/pyteomics/src/default/CHANGELOG
* * Fix broken symlinksultima2017-06-301-2/+3
| | | | | | | | PR: 220081 Reported by: <metaf2xml@users.sourceforge.net> Reviewed by: lifanov (mentor) Approved by: lifanov (mentor) Differential Revision: https://reviews.freebsd.org/D11409
* Update devel/readline to 7.0 patch 3sunpoet2017-06-273-2/+3
| | | | | | | | | | | - Bump PORTREVISION for shlib change Changes: https://cnswww.cns.cwru.edu/php/chet/readline/CHANGES https://lists.gnu.org/archive/html/bug-bash/2016-09/msg00107.html https://lists.gnu.org/archive/html/bug-readline/2017-01/msg00002.html Differential Revision: https://reviews.freebsd.org/D11172 PR: 219947 Exp-run by: antoine
* - Update to 3.1.0wen2017-06-272-5/+4
|
* - Add new port: science/R-cran-udunits2tota2017-06-274-0/+26
| | | | | | Provides simple bindings to Unidata's udunits library. WWW: https://cran.r-project.org/web/packages/udunits2/
* Make ninja opt-out in cmake.mktcberner2017-06-261-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Using ninja instead of make (1) can lead to significant speed ups while building. Therefore switch from having the ninja generator opt-in to having it opt-out. Previously cmake-ports that wanted to use ninja could set CMAKE_NINJA=yes now, ports that do not work with ninja can set cmake:<existing args>,noninja Note, that needing this should be an exception and most often points to a broken cmake of the port. The ports using cmake were modified * removed USES=gmake, if ninja is used * removed MAKE_ARGS, if ninja is used * added the cmake-argument noninja if necessary PR: 219629 PR: 213331 Exp-run by: antoine Reviewed by: rakuco Differential Revision: https://reviews.freebsd.org/D10748
* - Update to 2.11.2.stephen2017-06-262-4/+4
|
* * Updated to 2.11ultima2017-06-262-4/+5
| | | | | | | | | | | | * New maintainer Jov <amutu@amutu.com> Changelog: https://www.csie.ntu.edu.tw/~cjlin/liblinear/log PR: 220104 Submitted by: Jov <amutu@amutu.com> (maintainer) Reviewed by: matthew (mentor) Approved by: matthew (mentor) Differential Revision: https://reviews.freebsd.org/D11351
* * Updated to 2.2ultima2017-06-263-7/+32
| | | | | | | | | | Changelog: http://metaf2xml.sourceforge.net/RelInfo-2.2.txt PR: 220081 Submitted by: <metaf2xml@users.sourceforge.net> Reviewed by: matthew (mentor) Approved by: matthew (mentor) Differential Revision: https://reviews.freebsd.org/D11313
* Sort NOT_FOR_ARCHS. While here, clean up some BROKEN usages.linimon2017-06-251-1/+1
| | | | Approved by: portmgr (tier-2 blanket)
* - Add LICENSEamdmi32017-06-211-14/+15
| | | | - Switch to options helpers
* - Update to 2.11.1.stephen2017-06-202-4/+4
|
* - Update to 2.11.0.stephen2017-06-203-15/+4
|
* science/InsightToolkit: Update to 4.12.0woodsb022017-06-203-4/+16
| | | | | Changes this release: http://public.kitware.com/pipermail/community/2017-June/013214.html
* * Updated to 3.22ultima2017-06-202-4/+5
| | | | | | | | | | | | * New maintainer Jov <amutu@amutu.com> Changelog: http://www.csie.ntu.edu.tw/~cjlin/libsvm/log PR: 220102 Submitted by: Jov <amutu@amutu.com> (maintainer) Reviewed by: matthew (mentor) Approved by: matthew (mentor) Differential Revision: https://reviews.freebsd.org/D11269
* qa: add check for NO_ARCHdbn2017-06-196-8/+12
| | | | | | | | | | | | | | | | | | If NO_ARCH is set then check that no FreeBSD elf(5) files are in $STAGEDIR. If an elf(5) file is bundles as part of the package, but is not meant to be run directly (i.e. the elf(5) file is a payload, and not compiled) then those files can be added to NO_ARCH_IGNORE to avoid the check from failing, Changes to ports: - Ports that have NO_ARCH set, but actually compile files have had NO_ARCH removed. - Ports that have elf(5) payloads have had those files added to NO_ARCH_IGNORE. - R-cran ports that do not set USES=cran:compiles have NO_ARCH set, PR: 218976 Reviewed by: antoine, mat Approved by: portmgr
* science/vmd: various fixesdbn2017-06-184-45/+70
| | | | | | | | | | | | | | | | | | | | | - fix spelling of VMD license [1] - use USES=tcl,tk instead of direct dependency - patch vmd to support (tcl|tk)86 - fix shebang for tcl [1] - fix detection of netcdf - add sqlite as a dependency (for dmsplugin) [1] - add expact as a dependency (for hoomdplugin) - rework configuration: - explicitly list required components (CONFIGURE_ARGS) - call configure directly (instead of via gmake(1)) - patch configure to accept TCLLDFLAGS and TKLDFLAGS - pass PREFIX as an environment variable instead of using sed(1) - patch Make-arch to accept environment TCLLDFLAGS and NETCDFLDFLAGS - add support for parallel building (except for building plugins) - bump PORTREVISION PR: 219642 Reported by: Yuri Victorovich <yuri@rawbw.com>
* - Fix compilation error (which presumably comes from a change in header filesstephen2017-06-181-0/+11
| | | | associated with python2).
* Upgrade science/hdf5-18 to 1.8.19.thierry2017-06-173-20/+20
| | | | | Changelog at <https://support.hdfgroup.org/HDF5/doc1.8/ADGuide/Changes.html#1819>.
* Remove CONFLICTS: science/netcdf-ftn and science/netcdf3-ftn have been ↵sunpoet2017-06-111-2/+0
| | | | removed over 3 years
* Update to 0.3sunpoet2017-06-102-6/+8
| | | | | | | | | | - Fix LICENSE - Add LICENSE_FILE - Add missing *_DEPENDS Changes: https://github.com/scikit-fuzzy/scikit-fuzzy/releases PR: 219879 Submitted by: Yuri Victorovich <yuri@rawbw.com> (maintainer)
* science/hypre: Fix build with openmpijrm2017-06-091-4/+10
| | | | | | | | | - specify full path to mpicc/mpicxx when setting CC/CXX - specify mpi include/lib dirs - set WRKSRC_SUBDIR instead of WRKSRC - whitespace changes Approved by: pfg (maintainer)
* Mark BROKEN: fails to buildantoine2017-06-091-0/+2
| | | | | | | | | | [ 13%] Building CXX object CMakeFiles/UnitTests.dir/Orthanc/Core/SQLite/Connection.cpp.o /usr/bin/c++ -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_HAS_DATE_TIME=1 -DBOOST_HAS_FILESYSTEM_V3=1 -DBOOST_HAS_LOCALE=1 -DBOOST_HAS_REGEX=1 -DORTHANC_ENABLE_BASE64=0 -DORTHANC_ENABLE_LOGGING=0 -DORTHANC_ENABLE_MD5=0 -DORTHANC_SQLITE_STANDALONE=1 -DORTHANC_STANDALONE=1 -DORTHANC_STATIC=0 -DORTHANC_WEBVIEWER_VERSION=\"2.2\" -I/wrkdirs/usr/ports/science/orthanc-webviewer/work/.build/AUTOGENERATED -I/usr/local/include -I/usr/local/include/jsoncpp -I/usr/local/include/gdcm-2.6 -O2 -pipe -fstack-protector -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include -I/usr/local/include -O2 -pipe -fstack-protector -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -o CMakeFiles/UnitTests.dir/Orthanc/Core/SQLite/Connection.cpp.o -c /wrkdirs/usr/ports/science/orthanc-webviewer/work/OrthancWebViewer-2.2/Orthanc/Core/SQLite/Connection.cpp /wrkdirs/usr/ports/science/orthanc-webviewer/work/OrthancWebViewer-2.2/Orthanc/Core/SQLite/Connection.cpp:346:23: error: no matching constructor for initialization of 'Orthanc::SQLite::FunctionContext' FunctionContext context(rawContext, argc, argv); ^ ~~~~~~~~~~~~~~~~~~~~~~ Reported by: pkg-fallout
* New port, science/hypre: Scalable Linear Solvers and Multigrid Methodsjrm2017-06-085-0/+143
| | | | | | | | WWW: http://www.llnl.gov/casc/hypre/ PR: 219709 Submitted by: pfg (maintainer) Differential Revision: https://reviews.freebsd.org/D11048
* Fix build with SQLite 3.19.2sunpoet2017-06-062-0/+39
| | | | | Submitted by: Pavel Volkov <pavelivolkov@gmail.com> Approved by: portmgr (blanket)
* - Update to 2.15tota2017-06-062-4/+4
|
* Update to 1.22.0sunpoet2017-06-052-4/+4
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* Update to 2.7.0tcberner2017-06-043-4/+20
| | | | | PR: 219754 Submitted by: xmj (maintainer)
* Convert to options helpersunpoet2017-06-021-13/+5
| | | | - Remove outdated PERL_LEVEL check
* science/InsightToolkit: Update to 4.11.1woodsb022017-06-013-16/+4
| | | | | Changes this release: http://public.kitware.com/pipermail/insight-users/2017-May/054519.html
* Remove a clash due to #include filedlg.h to fix the build with Gcc 6.thierry2017-06-012-1/+15
| | | | | PR: 219300 Obtained from: Gilles Duvert (upstream)
* Update science/hdf5 to 1.10.1sunpoet2017-05-3018-26/+48
| | | | | | - Bump PORTREVISION for shlib change Changes: https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/hdf5-1.10.1-RELEASE.txt
* Mark some ports failing on armv6, for errors classified as "linker_error".linimon2017-05-281-0/+2
| | | | | | While here, pet portlint. Approved by: portmgr (tier-2 blanket)
* Fix CONFLICTS_INSTALLsunpoet2017-05-282-2/+2
| | | | | PR: 219388 Submitted by: pawel
* Mark some ports failing on armv6, for errors classified as "???",linimon2017-05-271-1/+1
| | | | | | | | part 2. While here, pet portlint. Approved by: portmgr (tier-2 blanket)
* science/openbabel: Update to 2.4.1dbaio2017-05-246-659/+91
| | | | | | | | | | | | | | | Patches removed: patch-git_c3abbdda, patch-gcc5-support (Integrated upstream) patch-scripts__CMakeLists.txt (Builds without it) While here, set LICENSE and simplify BUILD_DEPENDS. Changes: https://github.com/openbabel/openbabel/releases PR: 219382 Submitted by: Yuri Victorovich <yuri@rawbw.com> Approved by: garga (mentor) Differential Revision: https://reviews.freebsd.org/D10837
* Revision bump of all ports with USE_GL after consolidation of mesa-libsrezny2017-05-2313-12/+13
| | | | | Approved by: swills (mentor) Differential Revision: https://reviews.freebsd.org/D10845
* - Update to 0.9.1wen2017-05-232-4/+4
|
* - Update to 1.85.1wen2017-05-232-5/+7
|
* Mark some ports failing on power64. In cases where the error messagelinimon2017-05-231-0/+2
| | | | | | | | | was a stub, provide a real one. While here, pet portlint. Approved by: portmgr (tier-2 blanket) Reported by: swills
* Update to 1.8.2sunpoet2017-05-232-5/+5
| | | | Changes: https://code.zmaw.de/news/375
* Update to 2.2.25sunpoet2017-05-212-4/+9
| | | | | | - Add LICENSE Changes: https://github.com/Unidata/UDUNITS-2/blob/master/CHANGE_LOG
* Mark some ports failing on power64. In cases where the error messagelinimon2017-05-201-1/+1
| | | | | | | | | was a stub, provide a real one. While here, pet portlint. Approved by: portmgr (tier-2 blanket) Reported by: swills
* Switch to wxgtk30.thierry2017-05-204-2/+46
| | | | PR: 219300
* devel/google{test,mock}: update to 1.8.0.50jbeich2017-05-194-4/+4
| | | | Changes: https://github.com/google/googletest/compare/a2b8a8e...59c795c
* Update the comment explaining the use of USE_GCC=yes to currentgerald2017-05-151-4/+4
| | | | | realitiy (gfortran48 has not been the default for a while), and in fact general enough for a soon-to-come update of lang/gcc.
* Mark some ports failing on power64. In cases where the error messagelinimon2017-05-141-0/+2
| | | | | | | | was a stub, provide a real one. While here, pet portlint. Approved by: portmgr (tier-2 blanket)
* Consolidate the Mesa ports, update to 17.0.4, and add Wayland optionrezny2017-05-131-6/+4
| | | | | | | | | | | | | | | | * libGL, libEGL, libglesv2, libglapi, and gbm have been moved into mesa-libs, graphics/dri has been renamed to mesa-dri, and USE_GL has been adjusted * mesa-libs has a new WAYLAND option that enables platform support in libEGL * mesa-dri now depends on graphics/s2tc for compressed texture support [1] * re-remove obsolete dependency on makedepends [2] * correct sed fix backported from 17.1 [3] PR: 218799 (exp-run), 212762 [1], 218552 [2], 218562 [3] Submitted by: dbn [1], jbeich [2,3] Reported by: afiskon@devzen.ru [1] Reviewed by: kwm, johalun0@gmail.com Approved by: portmgr, swills (mentor) Differential Revision: https://reviews.freebsd.org/D10448
* Update my email addressdbaio2017-05-091-1/+1
| | | | | Approved by: garga (mentor) Differential Revision: https://reviews.freebsd.org/D10648
* - Update to 1.6-8tota2017-05-072-4/+5
| | | | - Add "compiles" argument to USES=cran
* - Update to 2.12tota2017-05-072-4/+4
|
* - Fix build with gcc5miwi2017-05-061-0/+14
| | | | PR: 213985
* - Fix build with gcc5miwi2017-05-051-1/+3
| | | | PR: 218780
* Cleanup.thierry2017-05-051-3/+9
| | | | | PR: 216315 Submitted by: pfg
* Fix shebangstcberner2017-05-041-4/+5
| | | | | | Reviewed by: mat Approved by: mat (mentor) Differential Revision: https://reviews.freebsd.org/D10527
* Mark some ports failing on aarch64, and, in a few cases, other tier-2linimon2017-05-032-2/+7
| | | | | | | | archs. While here, pet portlint. Approved by: portmgr (tier-2 blanket)
* - Add LICENSEamdmi32017-05-022-3/+7
| | | | | - Add NO_ARCH - Update WWW
* devel/boost-*: update to 1.64.0jbeich2017-05-0211-9/+11
| | | | | | | | Changes: http://www.boost.org/users/history/version_1_64_0.html PR: 218835 Approved by: office (bapt) Exp-run by: antoine Differential Revision: https://reviews.freebsd.org/D10472
* Update math/gsl to 2.3tcberner2017-05-028-6/+113
| | | | | | | | | | | | | | | This release introduces some new features and fixes several bugs: http://savannah.gnu.org/forum/forum.php?forum_id=8751 * update to 2.3 and take maintainership * update math/py-gsl to 2.2.0 for gsl2 support * update math/rubygem-rb-gsl to 2.1.0.2 for gsl2 support PR: 218952 Exp-run by: antoine Reviewed by: mat, rakuco Approved by: rakuco (mentor) Differential Revision: https://reviews.freebsd.org/D10522
* science/iboview: new port. iboview is an advanced program for analyzing ↵jmd2017-05-027-0/+113
| | | | | | | | molecular electronic structure. Reviewed by: swills (mentor) Approved by: swills (mentor) Differential Revision: https://reviews.freebsd.org/D10553
* Provide more descriptive error messages for ports failing on powerpc64.linimon2017-04-301-2/+2
| | | | | | While here, pet portlint. Approved by: portmgr (tier-2 blanket)
* Chase ffmpeg 3.3 update (ABI changes)riggs2017-04-252-2/+2
| | | | | PR: 218658 Submitted by: riggs
* - Update WWWamdmi32017-04-231-1/+1
|
* - localbaesamdmi32017-04-211-5/+4
| | | | - Fix shebangs
* Add LICENSEsunpoet2017-04-181-0/+5
| | | | | PR: 217786 Reported by: Anton Shterenlikht <mexas@bris.ac.uk>
* Add LICENSEsunpoet2017-04-181-0/+5
| | | | | PR: 217786 Reported by: Anton Shterenlikht <mexas@bris.ac.uk>
* science/InsightToolkit: Fix build with clang 4.0woodsb022017-04-151-0/+11
| | | | | | | PR: 216617 Reported by: jbeich Obtained from: http://review.source.kitware.com/#/c/22043/ MFH: 2017Q2
* Update to 1.8.1sunpoet2017-04-142-5/+5
| | | | Changes: https://code.zmaw.de/news/369
* - Sort out options (for instance, OPTIMIZED_CFLAGS does not belong to python ↵amdmi32017-04-121-28/+17
| | | | | | | | | slave port) - Add NO_ARCH for libsvm-python - Switch to PORTDOCS - Switch to options helpers - Cosmetic fixes
* science/vmd: unbreak builddbn2017-04-046-43/+50
| | | | | - Remove patches that are not required with the new sources for stride - Add stride license test
* Update to 1.21.0sunpoet2017-04-023-5/+5
| | | | | | - Update WWW Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* Bump PORTREVISIONs for ports depending on the canonical version of GCC andgerald2017-04-0137-32/+37
| | | | | | | | | | | | | | lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some circumstances such as versions of FreeBSD or platforms). This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using using Mk/bsd.octave.mk which in turn has USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang, c++11-lang, c++0x, c11, or gcc-c++11-lib. PR: 216707
* Update to 4.2.0cs2017-03-303-186/+197
|
* - Update devel/libpthread-stubs to 0.4ashish2017-03-291-3/+3
| | | | | | | | - Chase libpthread-stubs update, and also switch to BUILD_DEPENDS from LIB_DEPENDS, as port is now only .pc file PR: 218015 Submitted by: rezny
* science/orthanc: Fix build with LibreSSLbrnrd2017-03-261-0/+12
| | | | | | | | - LibreSSL removed FIPS support completely PR: 217352 Approved by: mp39590@gmail.com (maintainer) Obtained from: https://bitbucket.org/sjodogne/orthanc/pull-requests/4
* - Introduce couple of useful mathematical options and debugging supportdanfe2017-03-201-3/+13
| | | | | | - Respect CFLAGS/CXXFLAGS (when building the port in release mode) PR: 204179
* - Update to 0.19.0wen2017-03-192-8/+7
|
* - Update to 1.3.8.1olivierd2017-03-052-5/+10
| | | | - Adjust dependencies
* - Update to 1.0.3wen2017-03-012-5/+4
|
* - Bump PORTREVISION. Freepascal was updatedacm2017-02-271-1/+2
| | | | - Take maintainership
* - Bump PORTREVISION. Freepascal was updatedacm2017-02-271-2/+2
| | | | - Take maintainership
* science/py-netCDF4: Update version 1.2.4=>1.2.7bofh2017-02-262-5/+4
|
* Update to 1.3.3sunpoet2017-02-252-4/+4
| | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog
* Update to 1.3.3sunpoet2017-02-252-5/+6
| | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.md#changelog
* Update to 3.4.1.vanilla2017-02-222-4/+4
|
* Update to 1.20.0sunpoet2017-02-172-4/+4
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* Update to 1.8.0sunpoet2017-02-175-22/+21
| | | | | | - Regenerate patch files with makepatch: Changes: https://code.zmaw.de/news/363
* Add GRIB_API optionsunpoet2017-02-121-1/+4
|
* science/InsightToolkit: Fix pkg-plist post r433341woodsb022017-02-121-1/+0
| | | | Reported by: tcberner
* Re-enable the opthion for math/qhull.thierry2017-02-082-6/+16
| | | | Don't bump PORTREVISION because it is not [yet] enabled by default.
* GDL version 0.9.7 was released on 21st January 2017, 6 days after thethierry2017-02-083-12/+9
| | | | | | | port was last updated to 0.9.7.v2 (which is older than 0.9.7). PR: 216828 Submitted by: woodsb02
* math/plplot: Update to 5.12.0woodsb022017-02-051-0/+1
| | | | | Changes this release: https://sourceforge.net/p/plplot/news/2017/01/plplot-5120-has-been-released/
* science/InsightToolkit: Update to 4.11.0woodsb022017-02-053-7/+28
| | | | | Changes this release: http://public.kitware.com/pipermail/insight-users/2017-January/054193.html
* Switch ports to use USE_PYQT=<foo> instead of using RUN_- and BUILD_DEPENDStcberner2017-02-042-7/+6
| | | | | | | | | pyqt.mk provides USE_PYQT=<list> to depend on its components. Convert the ports not yet using it to it. Reviewed by: rakuco, mat Approved by: rakuco (mentor) Differential Revision: https://reviews.freebsd.org/D9261
* Add OPENMPI2 optionsunpoet2017-02-021-1/+5
|
* add science/libgeodecomp - auto-parallelizing library for computer simulationslifanov2017-02-017-0/+279
| | | | | | | | | | | | | | | | | LibGeoDecomp (Library for Geometric Decomposition codes) is an auto-parallelizing library for computer simulations. It is specifically targeted computational science applications in the context of supercomputers and heterogeneous systems. The library eases development of such tightly coupled codes by essentially taking over the parallel programming: it handles both, the parallelization itself and parameter tuning. This enables scientists to focus on their simulation code, rather than the technical details of the parallel computer. PR: 213688 Submitted by: Kurt Kanzenbach <kurt@kmk-computers.de> Reviewed by: matthew Approved by: matthew (mentor) Differential Revision: https://reviews.freebsd.org/D9390
* Bump PORTREVISION for ports affected by the fix the last commit.mat2017-02-011-1/+1
| | | | | Done with: Tools/scripts/bump-revision.sh Sponsored by: Absolight
* Update to 1.8.1sunpoet2017-01-313-33/+13
| | | | Changes: http://trac.mcs.anl.gov/projects/parallel-netcdf/wiki/ReleaseNotes-1.8.1
* - With license framework, there's no longer need to shove license to docs, ↵amdmi32017-01-302-8/+1
| | | | pkgmessage and restricted
* Add JASPER and SZLIB optionssunpoet2017-01-301-4/+12
|
* Update to 2.2.24sunpoet2017-01-262-4/+4
| | | | Changes: https://github.com/Unidata/UDUNITS-2/blob/master/CHANGE_LOG
* Update to 2.2.23sunpoet2017-01-222-4/+4
| | | | Changes: https://github.com/Unidata/UDUNITS-2/blob/master/CHANGE_LOG
* science/openbabel: unbreak with GCC >= 6jbeich2017-01-221-0/+1
| | | | | | | GCC defaults to C++14 since 6.0 which no longer converts istream to bool by default. Instead of fixing just downgrade to C++98. PR: 216036
* Update WWW: SF redirects to https://sourceforge.net/projects/<PROJECT_NAME>/sunpoet2017-01-211-1/+1
|
* - Update to 2.0.4amdmi32017-01-204-50/+131
| | | | | PR: 216252 Submitted by: pfg@FreeBSD.org (maintainer)
* The output of tools like awk, date, sort, tr,... depends on the currenttijl2017-01-181-1/+1
| | | | | | | | | | | | | | | | | | locale set by the user. Add LANG=C and LC_ALL=C at the beginning of bsd.port.mk and export them so all commands are executed with the C locale. LC_ALL=C overrides all other LC_* variables. LANG is used by setlocale(3) as default value for LC_* variables, so normally it isn't used when LC_ALL is set, but there's code out there that looks at LANG directly so it's safer to set it as well. The only commands not captured by this are != assignments before any inclusion of bsd.port.*mk. Introduce USE_LOCALE=<locale> that adds LANG=<locale> and LC_ALL=<locale> to CONFIGURE_ENV and MAKE_ENV so upstream build systems can be executed with a different locale (e.g. USE_LOCALE=en_US.UTF-8). PR: 215882 Exp-run by: antoine Approved by: portmgr (antoine)
* Change the site address.thierry2017-01-172-3/+8
| | | | Since I'm there, explicit the dependencies.
* Upgrade GDL to 0.9.7v2.thierry2017-01-162-4/+4
|
* Update to 1.3.0sunpoet2017-01-1312-244/+65
| | | | | | | | | | | - Update COMMENT - Update LICENSE_FILE - Add EXAMPLES option - Update pkg-descr - Update WWW - Bump PORTREVISION for dependent ports Changes: https://github.com/libkml/libkml/releases
* - Remove always-true/false conditions after FreeBSD 9, 10.1, 10.2 EOLamdmi32017-01-113-21/+2
| | | | Approved by: portmgr blanket
* Update to 2.2.21sunpoet2017-01-112-3/+4
| | | | Changes: https://github.com/Unidata/UDUNITS-2/blob/master/CHANGE_LOG
* - Update to 5.2.0wen2017-01-109-655/+518
| | | | | | PR: 214684 Submitted by: yuri@rawbw.com Approved by: maintainer
* science/vmd: correct the wording of numpy keywordrm2017-01-091-2/+2
|
* science/vmd: fix port to depend on numpy.dbn2017-01-091-2/+3
| | | | Reported by: Ruslan Makhmatkhanov <cvs-src@yandex.ru>
* science/vmd: update to 1.9.3dbn2017-01-095-428/+520
| | | | | | | | | | | | | | | | | | | | - update MASTER_SITES to use upstream stride (the old - repackages - sources were no longer working). - take maintainership: although I don't use the software I am happy to respond to PR's and check for updates periodically, - add license information for each source: - vmd: custom license that requires the user to explicitly download (and accept the license before downloading). Mark the license as auto-accept here as the present of the DISTFILE will indicate that the license has been accepted - tachyon: standard 3-clause BSD license :-) - stride: almost BSD license, except only for academic use (i.e. non-commersial) and a requirement to report bugs to the author. Add a plain text copy of the license file to the port. - add missing dependencies: gl, x11 - fix detection of python. - simplify configure patch. - update pkg-plist for changes in plugin versions.
* Remove math/proj.4.thierry2017-01-081-1/+1
| | | | | | math/libproj was already duplicated as graphics/proj. Reported by: sunpoet and cmt
* Upgrade to 0.9.7.thierry2017-01-084-25/+35
| | | | | - improvement on X11 display speed through network - lot of minors bugs
* devel/boost-*: update to 1.63.0jbeich2017-01-068-8/+8
| | | | | | | | Changes: http://www.boost.org/users/history/version_1_63_0.html PR: 215598 Exp-run by: antoine Approved by: office (bapt) MFH: 2017Q1
* Never set WRKSRC when using USE_GITHUB.mat2017-01-041-1/+1
| | | | | | | | | | If you want to set WRKSRC, set GH_PROJECT instead. - The GitHub URLs are case insensitive, but the distribution files you get out of them are not. - If the repository was renamed, the old URL will still work, but the distribution name will be ith the new name. Sponsored by: Absolight
* Cleanup BROKEN/IGNORE for 10.3-mat2017-01-031-7/+1
| | | | Sponsored by: Absolight
* Update to 1.19.0sunpoet2017-01-022-4/+4
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* science/rubygem-ruby-netcdf: update to 0.7.2swills2017-01-022-3/+4
|
* Add libaec 1.0.0sunpoet2017-01-016-0/+60
| | | | | | | | | | | | | | | | | | | | Libaec provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples). The library achieves best results for low entropy data as often encountered in space imaging instrument data or numerical model output from weather or climate simulations. While floating point representations are not directly supported, they can also be efficiently coded by grouping exponents and mantissa. Libaec implements Golomb-Rice coding as defined in the Space Data System Standard documents 121.0-B-2 and 120.0-G-2. Libaec includes a free drop-in replacement for the SZIP library. Just replace SZIP's shared library libsz.so* with libaec.so* and libsz.so* from libaec. Code which is dynamically linked with SZIP such as HDF5 should continue to work with libaec. No re-compilation required. HDF5 files which contain SZIP encoded data can be decoded by HDF5 using libaec and vice versa. WWW: https://gitlab.dkrz.de/k202009/libaec
* Convert to options target helpersunpoet2017-01-011-1/+1
|
* Update gchemutils to 0.14.16.kwm2017-01-014-30/+10
| | | | Record indirect dependancies.
* - Update to 1.071sunpoet2016-12-314-7/+8
| | | | | | - Add LICENSE - Sort PLIST - Remove Author line
* - Update to 1.10wen2016-12-292-4/+4
| | | | | PR: 215589 Submitted by: stb@lassitu.de(maintainer)
* - Update DESTDIR support: use usptream patch with modified MANDIR ↵sunpoet2016-12-294-34/+32
| | | | | | | | (prefix/share/man -> prefix/man) - Update WWW: use https:// Obtained from: http://trac.mcs.anl.gov/projects/parallel-netcdf/changeset/2745
* - Cosmetic changesunpoet2016-12-291-1/+1
|
* - Add LICENSEamdmi32016-12-292-6/+31
| | | | | | | - Switch to USES=localbase - Unbreak on 11+ by backporting upstream revision 2055 Approved by: portmgr blanket
* Pass -fPIC when building the port's static libraries.rakuco2016-12-284-15/+16
| | | | | | | | | | | This makes it possible to use those libraries with shared libraries on at least amd64. While here, set LICENSE and drop MAKE_JOBS_UNSAFE. PR: 209982 Submitted by: Jason Bacon <bacon4000@gmail.com> (maintainer) MFH: 2016Q4
* - Update to 0.8.2wen2016-12-282-4/+4
|
* Reset ports per maintainer request.rene2016-12-261-3/+2
| | | | | PR: 215557 Submitted by: A.J. "Fonz" van Werven (maintainer)
* - Update to 1.8.0sunpoet2016-12-213-8/+8
| | | | Changes: http://trac.mcs.anl.gov/projects/parallel-netcdf/wiki/ReleaseNotes-1.8.0
* science/gramps: Update to 4.2.5woodsb022016-12-192-4/+4
| | | | | | | Changes this release: https://gramps-project.org/2016/12/gramps-4-2-5-released/ Approved by: adamw (mentor, implicit)
* Get rid of QT_PREFIX in favour of PREFIX.tcberner2016-12-191-1/+1
| | | | | | | | QT_PREFIX was a remnant of a bygone time. Reviewed by: rakuco Approved by: rakuco (mentor) Differential Revision: https://reviews.freebsd.org/D8825
* - Add UUID optionsunpoet2016-12-171-2/+6
| | | | - Bump PORTREVISION for dependency change
* Switch USES=compiler:gcc-c++11-lib to use base libc++ on 10.2+ systemsjbeich2016-12-161-1/+1
| | | | | | | PR: 215192 Requested by: dim Exp-run by: antoine Approved by: antoine
* - Update to 1.13.0sunpoet2016-12-132-5/+5
| | | | Changes: https://github.com/pysal/pysal/releases
* - Fix build on FreeBSD 9 though I cannot reproduce the failure on my poudrieresunpoet2016-12-131-1/+2
| | | | - Add missing USES=execinfo
* - Update sqlalchemy dependencywen2016-12-121-2/+2
| | | | | PR: 215221 Submitted by: rene@
* Those ports build fine with bsd makeantoine2016-12-121-1/+1
|
* Those ports build fine with bsd makeantoine2016-12-113-5/+3
|
* getdp builds fine with bsd makeantoine2016-12-111-1/+1
|
* Remove libintl.so.9 compatibility link that was added in r374303 totijl2016-12-093-3/+3
| | | | | prevent massive PORTREVISION bumps. Bump dependent ports that have not been bumped since.
* Remove libtiff.so.4 compatibility links that were added in r374303 totijl2016-12-092-0/+2
| | | | | prevent massive PORTREVISION bumps. Bump dependent ports that have not been bumped since.
* Bump PORTREVISIONS for ports depending on the canonical version of GCC andgerald2016-12-0732-17/+32
| | | | | | | | | | | | | | | lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some circumstances such as versions of FreeBSD or platforms), part II. The first part covered ports with USE_GCC=yes, USE_GCC=any, or one of gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang, c++11-lang, c++0x, c11 requested via USES=compiler. This adds ports with USES=fortran and ports using Mk/bsd.octave.mk which in turn has USES=fortran. PR: 214965 Reported by: thierry
* - Update to 1.7.0sunpoet2016-12-065-10/+38
| | | | | | | | | - Use CONFLICTS_INSTALL instead of CONFLICTS - Convert to options target helper - Pet portlint: fix diff header of patch files - Sort PLIST Changes: http://trac.mcs.anl.gov/projects/parallel-netcdf/wiki/ReleaseNotes-1.7.0
* - Update to 1.3.2sunpoet2016-12-042-3/+4
| | | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.rdoc#changelog https://github.com/Try2Code/cdo-bindings/commits/master
* - Add missing CGRIBEX_DESCsunpoet2016-12-041-0/+1
|
* - Update to 1.36sunpoet2016-12-032-4/+4
| | | | Changes: http://search.cpan.org/dist/Geo-BUFR/Changes
* Do not use post-stage. Use post-install instead.mat2016-12-022-2/+2
| | | | | | | | | | | | The only reason to use post-stage is because the port needs to do "things" at a later time, like some plist manipulation. While there, fold post-install in do-install targets when they are defined. PR: 214780 Submitted by: mat Exp-run by: antoine Sponsored by: Absolight
* Update to 3.4jhale2016-12-022-4/+5
| | | | | | | Add LICENSE_FILE PR: 214198 Submitted by: Jochen Neumeister <joneum@bsdproject.de>
* Don't quote {} in find -exec calls.mat2016-12-011-1/+1
| | | | | | | | Braces are not shell metacharacters, and they do not need to be quoted. By the time find parses its arguments and dicovers them, the quoting will have been removed by the shell anyway. Sponsored by: Absolight
* Upgrade to 1.8.18.thierry2016-12-013-12/+11
| | | | Changelog at https://support.hdfgroup.org/HDF5/doc1.8/ADGuide/Changes.html#1818
* - Update to 1.35sunpoet2016-12-013-9/+13
| | | | | | - Sort PLIST Changes: http://search.cpan.org/dist/Geo-BUFR/Changes
* science/afni: Use BUILD_DEPENDS/RUN_DEPENDS instead of LIB_DEPENDS forjrm2016-11-301-9/+12
| | | | | | | | | | math/R, because R may be configured without libR. While here, fix some stage-qa warnings about indirect dependencies. Reviewed by: AMDmi3 Approved by: bacon4000@gmail.com (maintainer) swills (mentor) Differential Revision: https://reviews.freebsd.org/D8649
* - Add LICENSE_FILEsunpoet2016-11-271-4/+5
| | | | | - Fix *_DEPENDS: textproc/expat2 is also a runtime dependency - Bump PORTREVISION for dependency change
* - Remove bogus NO_ARCH: this module installs .so filesamdmi32016-11-241-3/+3
| | | | | | - Cosmetic fixes Approved by: portmgr blanket
* - Fix PLIST when FORTRAN enabledsunpoet2016-11-241-1/+1
| | | | | PR: 214792 Submitted by: <rnmtw70@yandex.com>
* devel/boost-*: update to 1.62.0jbeich2016-11-238-8/+8
| | | | | | | | | | | | - Enable `long double` C99 math usage - Switch 9.x back to building with GCC Changes: http://www.boost.org/users/history/ PR: 199601 Submitted by: Chen Xu, bapt, amdmi3, truckman (based on) Reviewed by: rakuco (kde) (earlier version) Exp-run by: antoine (3 tries), truckman (consumers only, earlier versions) Approved by: bapt (office)
* - Update to 4.4.1.1sunpoet2016-11-233-5/+5
| | | | Changes: https://github.com/Unidata/netcdf-c/releases
* - Update to 1.10.0-patch1sunpoet2016-11-233-4/+8
| | | | Changes: https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.0-patch1/src/hdf5-1.10.0-patch1-RELEASE.txt
* In several dozen ports, use single space for WWW: line in pkg-descr, anddanfe2016-11-221-3/+3
| | | | reformat port description text in cases when it was notoriously broken.
* Bump PORTREVISIONS for ports depending on the canonical version of GCC andgerald2016-11-208-5/+8
| | | | | | | | | lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some circumstances such as versions of FreeBSD or platforms). In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang, c++11-lang, c++0x, c11 requested via USES=compiler.
* - Update to 1.12.0sunpoet2016-11-202-4/+4
| | | | Changes: https://github.com/pysal/pysal/releases
* - Update to 1.3.2sunpoet2016-11-202-3/+4
| | | | | Changes: https://github.com/Try2Code/cdo-bindings/blob/master/README.rdoc#changelog https://github.com/Try2Code/cdo-bindings/commits/master
* - Update to 1.7.2sunpoet2016-11-203-27/+6
| | | | | | - Fix CONFIGURE_ARGS Changes: https://code.zmaw.de/news/349
* - Update to 4.4.1sunpoet2016-11-203-5/+5
| | | | | Changes: http://www.unidata.ucar.edu/blogs/news/entry/netcdf-4-4-1 https://github.com/Unidata/netcdf-c/releases
* - Update to 1.18.0sunpoet2016-11-204-5/+7
| | | | Changes: https://software.ecmwf.int/wiki/display/GRIB/Latest+news
* - Update to 1.7.5sunpoet2016-11-203-6/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Add LICENSE_FILE - Strip shared library 1.7.5: - encodeBDS: recalculation of binscale (bug fix) [Klaus Wyser] 1.7.4: - encodeBDS: changed if to while in recalculation of binscale (bug fix) [report: Harald Anlauf] - grib_decode.tmpl: force nearest neighbor remapping from reduced gaussian grids (lveggy) - decode_array_2byte: optimisation using gribSwapByteOrder_uint16() - encode_array_2byte: optimisation using gribSwapByteOrder_uint16() 1.7.2: - gribDateTime: set ryear and century to 0 if they are undefined 1.7.1: - define grib_encode_array_2byte_double to select optimized simd version 1.7.0: - added support for time unit 14 (ISEC1_TABLE4_30MINUTES) - decode: added support of single precision floats - encode: added support of single precision floats 1.6.4: - encodeBDS: replaced intpow2(nbpv) by (1ULL << nbpv) - Update to 1.7.5
* Fix some misspellings that crept in on the last tier-2 cleanup pass.linimon2016-11-161-1/+1
| | | | Approved by: portmgr (tier-2 blanket)
* - Fix build by removing unneeded patchamdmi32016-11-151-9/+0
| | | | Approved by: portmgr blanket
* devel/google{test,mock}: update to 1.8.0.11jbeich2016-11-153-0/+3
| | | | Changes: https://github.com/google/googletest/compare/release-1.7.0...a2b8a8e
* Resurrect hdf5-18, because it is required by french/med and french/aster.thierry2016-11-1312-0/+468
| | | | | Two releases of HDF5 are available for download. HDF5-1.10 should read files created with earlier releases, but problem arise with MED and this version.
* science/py-pydicom: update 0.9.8 -> 0.9.9, unbreakpi2016-11-133-7/+9
| | | | | | | | - project moved to github PR: 214448 Changes: https://github.com/darcymason/pydicom/releases Approved by: wen
* `MFront` is a code generator which translates a set of closely relatedthierry2016-11-126-0/+949
| | | | | | | | | | | | | | | | | | | | | | | | | | domain specific languages into plain C++ on top of the `TFEL` library. Those languages covers three kind of material knowledge: - material properties (for instance the Young modulus, the thermal conductivity, etc.) - mechanical behaviours. Numerical performances of generated mechanical behaviours was given a particular attention. Various benchmarks shows that `MFront` implementations are competitive with native implementations available in the `Cast3M`, `Code-Aster` and `Cyrano3` solvers. - simple point-wise models, such as material swelling used in fuel performance codes. `MFront` comes with an handy easy-to-use tool called `MTest` that can test the local behaviour of a material, by imposing independent constraints on each component of the strain or the stress. This tool has been much faster (from ten to several hundred times depending on the test case) than using a full-fledged finite element solver. WWW: http://tfel.sourceforge.net/ PR: 212375 Submitted by: Pedro F. Giffuni
* Mark various leaf ports broken on aarch64, and, where appropriate, otherlinimon2016-11-112-3/+3
| | | | | | tier-2 archs. Approved by: portmgr (tier-2 blanket)
* Mark as broken on aarch64: fails to link with sbrk.linimon2016-11-102-0/+4
| | | | | | While here, pet portlint and remove stale ia64 lines. Approved by: portmgr (tier-2 blanket)
* - Add LICENSEamdmi32016-11-071-0/+3
| | | | - Add NO_ARCH
* science/sigrok-firmware-fx2lafw: Update to version 0.1.4.bsam2016-11-042-4/+7
|
* Cleanup no longer needed CHMOD usage after r424898.mat2016-11-031-3/+0
| | | | | | | PR: 213743 Submitted by: mat Exp-run by: antoine Sponsored by: Absolight
* math/py-numpy: track PORTEPOCH in consumersjbeich2016-10-292-2/+2
|
* The correct way to check for Perl's version is with PERL_LEVEL.mat2016-10-281-1/+1
| | | | Sponsored by: Absolight
* Use USES=pathfix where applicable.mat2016-10-211-2/+1
| | | | | | | | PR: 213195 Submitted by: mat Exp-run by: antoine Sponsored by: Absolight Differential Revision: https://reviews.freebsd.org/D8093
* ${RM} already has -f.mat2016-10-211-3/+3
| | | | | | | PR: 213570 Submitted by: mat Exp-run by: antoine Sponsored by: Absolight
* Reassign makc's ports back to the pool.rakuco2016-10-204-4/+4
| | | | | | | | | See "Maintainer Reset" in https://www.freebsd.org/portmgr/policies_contributors.html. makc's last commit was in March 31st (r412218), and his ports have been timing out since at least July (r418155). I also emailed him 2 weeks ago and have received no response so far.
* - Update to 0.8.1wen2016-10-192-3/+4
|
* Introduce new extensible virtual categories for KDEtcberner2016-10-192-6/+2
| | | | | | | | | | | | | | | | | | | | | A lot of KDE Ports share MASTERSITES, LICENSE and so one, as they are released as a bundle upstream, however, there was not really a clean way to share this information. Using these new categories, we can simplify the Makefiles for the diverse KDE ports. At the moment we support the virtual category * kde-kde4 In the future, this will be extended to * kde-frameworks * kde-plasma * kde-applications PR: 213406 Differential Revision: https://reviews.freebsd.org/D7645 Exp-run by : antoine Reviewed by: mat, rakuco Approved by: portmgr (mat), rakuco (mentor)
* - Update to 0.4-2tota2016-10-162-5/+5
| | | | - Fix LICENSE section
* Fix pkg-plist post r424008woodsb022016-10-151-1/+0
| | | | Approved by: adamw (mentor, implicit)
* science/InsightToolkit: Update to 4.10.1woodsb022016-10-153-5/+12
| | | | | | | Changes this release: http://public.kitware.com/pipermail/insight-users/2016-October/053981.html Approved by: adamw (mentor, implicit)
* - Update to 2.7tota2016-10-152-6/+11
|
* Update math/libqalculate to 0.9.10jhale2016-10-151-0/+1
| | | | | | | | | - Project is hosted on Github now Update math/qalculate to 0.9.9 - Qalculate now uses GTK+3 - Project is hosted on Github now - Take maintainership Bump PORTREVISION on ports that depend upon libqalculate due to shlib increase
* - Add LICENSEamdmi32016-10-141-1/+11
| | | | - Switch to options helpers
* Take maintainership.bsam2016-10-105-5/+5
| | | | Approved by: Uffe Jakobsen <uffe@uffe.org> (maintainer, via e-mail)
* - Update to 0.18.1wen2016-10-062-5/+9
|
* - Bump port revision because of r423146.stephen2016-10-031-1/+1
| | | | Reported by: Mathieu Arnold <mat@FreeBSD.org>
* - Add LICENSE.stephen2016-10-033-5/+10
| | | | - Use make makepatch.
* - Make it so that libcdf.so has an SONAME.stephen2016-10-031-4/+5
|
* - Update to version 1.7.1 [1]pawel2016-09-307-77/+64
| | | | | | | | | | | | | | - Enable multithreaded support with devel/libatomic_ops [1] - Remove not supported TCL option [1] - Add LICENSE_FILE - Convert to options helpers https://www.mbdyn.org/userfiles/downloads/CHANGELOG-1.5.txt https://www.mbdyn.org/userfiles/downloads/CHANGELOG-1.6.txt https://www.mbdyn.org/userfiles/downloads/CHANGELOG-1.7.txt PR: 212464 [1] Submitted by: pfg [1]
* Convert CC license names to r421995 spellingsjbeich2016-09-281-4/+1
| | | | | | | | While here fix common mistakes such as: - Missing "or (at your option) any later version" bit - LICENSE_FILE with LICENSE_COMB != single - LICENSE_COMB = dual for code + assets - Copy-pasting undocumented NC/SA restriction
* science/gramps: Update to 4.2.4woodsb022016-09-242-4/+4
| | | | | | | Changes this release: https://gramps-project.org/2016/09/gramps-4-2-4-released/ Approved by: adamw (mentor, implicit)
* - Update to 2.0wen2016-09-234-19/+25
| | | | | PR: 210944 Submitted by: metaf2xml@users.sourceforge.net